Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91565g00001 ATGGCACTCACCTTCATGTTGATGCTTCTCCTTGGAAACTTCACTACTATGGCATTCTCTGCTTCTCTAGTACAATCCGATGAGTTCGTGGGTTCTGTCAGCGAAATTATTGGACTCTTGAGAGATGTTGCTTCCATCTTGTCCAAGTTTAGCGGTGTATTTGTTGGTAATTTGCATCTCAACAACGCAATTCTTGACTCTCTTGAATTGTTGGACTTGTCCTCGGATGAGCTTGACTCCTCTATCTCGGCTATTCAAAACTCCAAAGGGAGAAACAACAGCAGACAAAATGCCTTATTAGGATCCGATTTGACAACATGGCTAAGTGCTGTCCTAGCAAATCTAGACACAATCACCGATGGATTCAAAGGCACAACAAGTATCGTCGAAGGTTTAATCTCCACCGGACTTAGACAAGTGACATCGCTAGTGAAGAATCTCCTCTTAAAAATTGATATCCCCCGGAATAATGATTTCTTCAATGATGGCGGAGAGGGTCGGGTATTTCCTTCGTGGGCGAGGCCGGAGGAGAGGAAGCTTCTGGAAGCAAATAATGGAGTGACTGCGGATGTTGTGGTGGCCGCAGATGGGACTGGAAATTTCACAAGGTTGACGGATGCGGTTTTGGCTGCGCCGGAAAAAAACTTAAAGAGGTTTGTGATTTACGTGAAGAGAGGTGTTTACAATGAGTACGTGGAGATTAATAAGAATAAGTGGAATATCGTGATGATCGGAGATGGTATCGGTACCACTGTTATCACCGGTAACCGGAGTTATGTCGATGGCTGGACCACTTTTGGTTCCGCCACCTTTGCTGTAGTTGGAAGAGGGTTCATAGCACGGGACATTACTTTCCAGAACACAGCAGGGCCAGAAAAGAAACAAGCAGTAGCACTAAGAACCCATTCTGACCTCTCCATCTACTTCCGTTGCGAAATCTCCGGTTACCAAGACAGCCTCTTCACTCTCTCAATGCGGCAATTCTTCAGAGAGTGCACAATTTCCGGCACCGTCGATTTCATCTTTGGGGACGCAACCGCATTCTTCCAAAAATGCAATATACTTGTCAAGAAAGGGTTACCAAAACAAAGGAATGCAATCACTGCACAAGGTAGAATAGATCCCAAAGAACCAACAGGGTTCTCCTTGCAATTCTGCAACATAACTGCTGATTCTGACCTCGTTCCATTTGTTAATACCACGGAATCTTTCTTGGGGAGGCCGTGGAAACAGTATTCAAGAACGGTTTTTCTGCAAAATTATATAAGCGATGTTATAAGCCCTCAAGGTTGGACACCATGGAATGAGAGCAACTTTTGGTTGGACACACTTTATTACGCTGAGTATATGAACACCGGTCCCGGTGCCGGAATAAATAAGAGAGTGAAATGGCCTGGATACCGTGTTTTGAAAAGCTCCGATGAAGCTAGTAATTTTACGGTGGCGAATTTCATTGAAGGAAATTTATGGTTGCCTTCAACTGGTGTGGCATTTACGGCTGGATTTGAAAAGGAAGTCGTTTAA 1524 0.4442 MALTFMLMLLLGNFTTMAFSASLVQSDEFVGSVSEIIGLLRDVASILSKFSGVFVGNLHLNNAILDSLELLDLSSDELDSSISAIQNSKGRNNSRQNALLGSDLTTWLSAVLANLDTITDGFKGTTSIVEGLISTGLRQVTSLVKNLLLKIDIPRNNDFFNDGGEGRVFPSWARPEERKLLEANNGVTADVVVAADGTGNFTRLTDAVLAAPEKNLKRFVIYVKRGVYNEYVEINKNKWNIVMIGDGIGTTVITGNRSYVDGWTTFGSATFAVVGRGFIARDITFQNTAGPEKKQAVALRTHSDLSIYFRCEISGYQDSLFTLSMRQFFRECTISGTVDFIFGDATAFFQKCNILVKKGLPKQRNAITAQGRIDPKEPTGFSLQFCNITADSDLVPFVNTTESFLGRPWKQYSRTVFLQNYISDVISPQGWTPWNESNFWLDTLYYAEYMNTGPGAGINKRVKWPGYRVLKSSDEASNFTVANFIEGNLWLPSTGVAFTAGFEKEVV 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91565g00001 507 Pfam Plant invertase/pectin methylesterase inhibitor 62 147 IPR006501 GO:0004857
Stsc91565g00001 507 ProSitePatterns Pectinesterase signature 1. 215 234 IPR018040 -
Stsc91565g00001 507 PANTHER PECTINESTERASE 61 492 - -
Stsc91565g00001 507 Gene3D - 184 502 IPR012334 -
Stsc91565g00001 507 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 153 IPR035513 -
Stsc91565g00001 507 Pfam Pectinesterase 190 488 IPR000070 GO:0030599|GO:0042545
Stsc91565g00001 507 SUPERFAMILY Pectin lyase-like 187 501 IPR011050 -
Stsc91565g00001 507 FunFam Pectinesterase 184 502 - -
Stsc91565g00001 507 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 59 148 IPR035513 -
Stsc91565g00001 507 ProSitePatterns Pectinesterase signature 2. 334 343 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91565g00001 Stsc-Chr91565 2546 4241 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91565g00001 5 502 Carbohydrate Esterase AT3G43270 56.008 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91565g00001 K01051 - gmx:100801813 597.816