Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91554g00002 ATGGAAAACTCCACCACTCTAATAATGAAGAAGATTCTTGAATCTTACAAAGGATTTGAGGACATCAACACACTGGTGGATATTGGTGGTAGTCTTGGGGTGAATGCCAAATTGATCACTTCAAAATATCCGCATGTAAAGGCTATTAATTTTGACCTGCCTCATGTCATAAAGCATGCTCCTCCCTATGCTGGAGTGGAGCACGTAGCAGGAGATATGTTTGAAAGTGTTCCTAAAGGAGATGCCATTTTTTTAAAGTGGATAATTCATGATTGGAGTGACGACAAGTGCTTGGAGCTGTTAAGGAATTGTCACAAGGCAATTCCAGATGATGGAAAGGTGATTGTGGTGGAGAGAATTATGCCGGTGGTGCCTGACACAACACTTGCTGCAAAATCTAGCTTCCAATCTGACATCTTAATGATGATTCAGAACCCAGGAGGCAAAGAGCGCACCCGCCAGGAATTCATGGAATTGATGAAAGCATCTGGTTTTAGTGCCATCAAATTGGTTTGCTGCGTCTCTGGTCTCTGGGTTATGGAGATCTTCAAGTAG 555 0.427 MENSTTLIMKKILESYKGFEDINTLVDIGGSLGVNAKLITSKYPHVKAINFDLPHVIKHAPPYAGVEHVAGDMFESVPKGDAIFLKWIIHDWSDDKCLELLRNCHKAIPDDGKVIVVERIMPVVPDTTLAAKSSFQSDILMMIQNPGGKERTRQEFMELMKASGFSAIKLVCCVSGLWVMEIFK 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91554g00002 184 Gene3D Vaccinia Virus protein VP39 4 174 IPR029063 -
Stsc91554g00002 184 Pfam O-methyltransferase domain 1 166 IPR001077 GO:0008171
Stsc91554g00002 184 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 181 IPR029063 -
Stsc91554g00002 184 PANTHER O-METHYLTRANSFERASE 1 165 IPR016461 GO:0008168
Stsc91554g00002 184 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 184 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91554g00002 Stsc-Chr91554 3547 4300 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91554g00002 1 184 Monolignol Biosynthesis Gene Families AT5G54160 57.065 5.08e-79 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91554g00002 K13066 - gmx:100789402 287.73