Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91550g00002 ATGGCTGCAACAAGAAGTATTCACAATGGTATCCTCCGAAACCATTCCCTCTATTTCTCCACTTCTTGTTACCGGAAACAGATTTCCCTTGCTAGTCTCTTCCAAAGGTACGGTTTCCCCTCATCCCAAGTTCCCCACTTCGTCTCCAAGAATTCCTTTCTCTTAGATTCCAACATTCCTGAACTCGAGAAATCACTTGCCACTCTCTTCTCCTTCCGAATTCCCCAAAATGCCCTTGTCTCCTTAATTCGCAAGTGCCCCGCTGTGCTGGAACCTGAGTTCCTCCAAAACTGGGAGCAGGGATTATCAAAGCTCAAGGCCATGAACCCTTCCTCGTCCATGATTGTGAATTTCTTGGAGTGTTCTAGAAGATTCCAGCTGGACCCAGTTGAGGCTTGCAAGAAAGTTGAGACGTTGAAGGGTTTGGGATTTTCCGATGACTTAGTGTCGAAGATTTTGGAAGGTTTTCCGAGCGTGATTGCAGTAAGCAAGAGGGAAATTGCTTCTGTGATTGAGTTTCTAGTGGAATTTGGGATTCCTAGGGACGAGGTGGTTGATCGAGTTGTGCGGTTGTACCCTAAGGTTTTGGGAATTGGGGTTGAACAGAGGTTGAAGCCCTTGATTCGTGAACTGAAGGAGTTAGGATTTTCTGTGCAAGAAATTAGGAGTGAGGTAATTAGGGTGCCAAGGATTCTGGGAATGGAGATTGGGGAATTTTCGCAGTGCTTGCGATTGCTAGAGGGTTTGAAGTGTAGGGAAGCCGTCAAAGAGAGAATTTTTCAAGAGGGTTTGCTGAGGGCTTGTTTTGAAGTGAAGTTAAGAGTGGATTGCTTGTGCGGTCAATGTTTGACTCGAAGTGATGCTTTGAAGTTGTTGTGGAAGGAGCCCAGGTTAATAACCTATGATGCCGAGTCCATTAAGAAGAAAATTAGGTTTTTGGTGCAGAGAATGAATTATAGTGTCGATTGTTTGCTTCATGTCCCTGAGTACTTGGGTGTGAACTTTGAGAAGCAGATTGTTCCTAGGTACAATGTGATGGAGTACTTGAAAGCAAAAGAAGCCCTCGGTTTCGAGGTTGGACTAAAGGACATGGTAAAGCCGAGTAGGCTTAGGTTTTACAATCTTTATGTCAAGCCCTATCCAGAGTGTGAAAAGATTTATGGGCGATTTTCTGGAACTACCAAAGTTAAAAGTAAGCATCCACCTGGTCTATGGAAACTCTTTAAACCTCACAAGTTCCCAACAACCTATGAAGATGCTAACAATTTGAAGTCATTCATGGACTCATTGTTATAG 1296 0.4398 MAATRSIHNGILRNHSLYFSTSCYRKQISLASLFQRYGFPSSQVPHFVSKNSFLLDSNIPELEKSLATLFSFRIPQNALVSLIRKCPAVLEPEFLQNWEQGLSKLKAMNPSSSMIVNFLECSRRFQLDPVEACKKVETLKGLGFSDDLVSKILEGFPSVIAVSKREIASVIEFLVEFGIPRDEVVDRVVRLYPKVLGIGVEQRLKPLIRELKELGFSVQEIRSEVIRVPRILGMEIGEFSQCLRLLEGLKCREAVKERIFQEGLLRACFEVKLRVDCLCGQCLTRSDALKLLWKEPRLITYDAESIKKKIRFLVQRMNYSVDCLLHVPEYLGVNFEKQIVPRYNVMEYLKAKEALGFEVGLKDMVKPSRLRFYNLYVKPYPECEKIYGRFSGTTKVKSKHPPGLWKLFKPHKFPTTYEDANNLKSFMDSLL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91550g00002 431 Pfam mTERF 127 239 IPR003690 GO:0003690|GO:0006355
Stsc91550g00002 431 Pfam mTERF 274 372 IPR003690 GO:0003690|GO:0006355
Stsc91550g00002 431 PANTHER CGI-12 PROTEIN-RELATED 26 380 IPR003690 GO:0003690|GO:0006355
Stsc91550g00002 431 SMART mt_12 321 352 IPR003690 GO:0003690|GO:0006355
Stsc91550g00002 431 SMART mt_12 150 180 IPR003690 GO:0003690|GO:0006355
Stsc91550g00002 431 SMART mt_12 186 217 IPR003690 GO:0003690|GO:0006355
Stsc91550g00002 431 SMART mt_12 112 145 IPR003690 GO:0003690|GO:0006355
Stsc91550g00002 431 SMART mt_12 222 252 IPR003690 GO:0003690|GO:0006355
Stsc91550g00002 431 SMART mt_12 289 320 IPR003690 GO:0003690|GO:0006355
Stsc91550g00002 431 Gene3D Transcription termination factor 3, mitochondrial 166 391 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91550g00002 Stsc-Chr91550 9961 13279 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Stsc91550g00002 mTERF 8.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91550g00002 - - aip:107646489 692.189