Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91550g00001 ATGGGAGGTTCCTCACCTTGTGCTTCTTGCAAATTGTTGAGGCGGCGTTGCACCAAAGAATGCATCTTTGCTCCTTATTTTCCTTCTGATGACCCTCGCAAATTTGCCATTGTTCACAAGGTCTTTGGCGCTAGCAATGTCAGCAAAATGCTCCAGGAGCTTCCAATTCATCAAAGAGGAGATGCTGTAAGCAGTTTAGTTTATGAGGCAAATGCAAGAGTGAGAGACCCTGTTTATGGTTGTGTTGGAGCAATATCATACCTTCAAAATCAGGTTACACAATTGCAAATGCAACTTGCAGTGGCTCAGGCAGAGATTCTAAGCATCCAGATGCAGCCAGAGCCTAGTAACAATAATACTACCTTATTACCAAGTCAATTATTATTAGATCAAGATGATAATGAAAAGTTTCTGCTCCTATCAACATCATCAGCTGAAAACAATAACAACTATGAGTTTCTTCCCCAATATCTTAGCAGCTTTGCTTCTTCTTCTTCTTCATCTTCAAATGTATTCCAAGACTCTGAGCCTCTTAAGAGAGAGTCTTTTTGTTAA 555 0.4018 MGGSSPCASCKLLRRRCTKECIFAPYFPSDDPRKFAIVHKVFGASNVSKMLQELPIHQRGDAVSSLVYEANARVRDPVYGCVGAISYLQNQVTQLQMQLAVAQAEILSIQMQPEPSNNNTTLLPSQLLLDQDDNEKFLLLSTSSAENNNNYEFLPQYLSSFASSSSSSSNVFQDSEPLKRESFC 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91550g00001 184 Coils Coil 85 105 - -
Stsc91550g00001 184 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 141 - -
Stsc91550g00001 184 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
Stsc91550g00001 184 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91550g00001 Stsc-Chr91550 4124 5059 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91550g00001 3 183 AS2 family AT2G30130 65.104 8.49e-76 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Stsc91550g00001 LOB 2.9e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91550g00001 - - aip:107644491 291.582