Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91537g00001 ATGGGAAGGGCTCCTTGTTGCGAGAAAGTGGGGTTGAAGAAGGGAAAGTGGACAGAAGAGGAGGATGAACTATTAACAAAGTATATTCAAGCCAATGGCGAAGGTTCATGGAAGTCATTGCCCAAAAATGCAGGATTATTAAGATGTGGGAAGAGCTGCAGGCTGAGGTGGGTTAACTATTTGAAAGGTGGCATTAAAAGAGGGAACTTTTCAGCTGAAGAGGAAGATACCATCGTCAACTTGCATGCATCTTTTGGCAACAGGTGGGCTACAATAGCGAGTCATTTGCCAGGAAGAACAGATAACGAAATTAAAAACTATTGGAACTCTAACCTCAGCAGAAAACTCTATTGCTTCTCCAATAATGTAACTACTACCGTACACACCACCCTCCCAGGGTTCACCCATATTCCTCCTCCAAACCCAAAACGACGTCGTCGTTGGCCCATCATCAAGAATAACAAATCCTACACACATATTTACAAGGTTGACCAAAACCCTAAAGAAACTGCACCTAAAAAGAATACAGATGATGATTTTCTTCTTATTCCAGCACCGCCTTCAACTCCTTCTATAGATATTGAGGCTTTGTTCAACCCCATAGAGGATTTCATGGAGCTTAACACCACCACGATGTTGAGAGCACAACATGAAGAAGTTGGTGGTGGTGGTGATTGGGCGTTGAATTTTGAGAATCTATGTGATGATGTTGAAAAATTAAATGAAGAAACCATGGCTACCACCGTTACTAATTATAGTAATAATAATTTGGCTGTGGACCAAGTTACAGAGGGTAGTAATAATAATAATAATAATGAGTGGGAGTGGAAGTGGGAGTGGGAGAGGGAGTTTAATAACAATGGATGTGAGAATAAGAAGGAGAACTTGCTGACATGGCTGTGGGAAGATGATTGGGAAAGCGATTTCATCAGATTGGAAGAGATGATGGGTCCCCATAAACAACTTGATGATATTGTTTCTTGGTTATTCTTCTGA 996 0.4116 MGRAPCCEKVGLKKGKWTEEEDELLTKYIQANGEGSWKSLPKNAGLLRCGKSCRLRWVNYLKGGIKRGNFSAEEEDTIVNLHASFGNRWATIASHLPGRTDNEIKNYWNSNLSRKLYCFSNNVTTTVHTTLPGFTHIPPPNPKRRRRWPIIKNNKSYTHIYKVDQNPKETAPKKNTDDDFLLIPAPPSTPSIDIEALFNPIEDFMELNTTTMLRAQHEEVGGGGDWALNFENLCDDVEKLNEETMATTVTNYSNNNLAVDQVTEGSNNNNNNEWEWKWEWEREFNNNGCENKKENLLTWLWEDDWESDFIRLEEMMGPHKQLDDIVSWLFF 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91537g00001 331 Gene3D - 11 67 - -
Stsc91537g00001 331 CDD SANT 69 112 IPR001005 -
Stsc91537g00001 331 CDD SANT 16 61 IPR001005 -
Stsc91537g00001 331 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Stsc91537g00001 331 FunFam Myb transcription factor 11 67 - -
Stsc91537g00001 331 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Stsc91537g00001 331 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Stsc91537g00001 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Stsc91537g00001 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Stsc91537g00001 331 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Stsc91537g00001 331 Gene3D - 69 116 - -
Stsc91537g00001 331 SMART sant 13 63 IPR001005 -
Stsc91537g00001 331 SMART sant 66 114 IPR001005 -
Stsc91537g00001 331 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Stsc91537g00001 331 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91537g00001 Stsc-Chr91537 16978 19694 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91537g00001 1 145 MYB Transcription Factor Family AT2G47460 63.576 4.30e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Stsc91537g00001 Myb_DNA-binding 8.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91537g00001 K09422 - gmx:100814275 261.536