Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91533g00001 ATGGCAAAAGGTTTGCATCTTTCTTCCCTCTCCCTACTTGTTATCTGTGTTGTTGCAGTGACATTCACAGGCAATAATTATGCAAGCGCAAGCCCTTCGAATTTCATAAAATCGTGTTGCAGCACCACGAGGTTTCCAAACGTGTGTGTGGAGTCTCTGTCTGTGTATGCCAACACCATCCAGCAAGACCCTCACGAGCTGGCCCAAACTGCCCTGTCTCTGAGCCTGAACAAGAGTGAGTCCACAAGGGCATTTGTGTCAAATTGCAACAAGTTGAGGGGCCTGAAGCCCAGAGAGTACGCAGCTCTGAAGGACTGTGCAGAGGAGATAAGCGACAGCTGTGACAGGCTGAGCAAGTCCCTGAAGGAGCTCAAGCTGTGCAAGGTGAAGGGTGAGGATTTCAGATGGCACATCAGCAATGTTGAGACCTGGGTTTCTTCTGCTTTGACTGATGACAGCACTTGCGGTGATGGCTTCTCCGGCAACGGTAAGATGAAGGATTCCATTAGGGGTAGAATGGTAAATCTAGCTCAGGTCACTAGCAATGCGTTGTCACTCATCACCCAGTATGCTTCTAAATACTAG 585 0.4906 MAKGLHLSSLSLLVICVVAVTFTGNNYASASPSNFIKSCCSTTRFPNVCVESLSVYANTIQQDPHELAQTALSLSLNKSESTRAFVSNCNKLRGLKPREYAALKDCAEEISDSCDRLSKSLKELKLCKVKGEDFRWHISNVETWVSSALTDDSTCGDGFSGNGKMKDSIRGRMVNLAQVTSNALSLITQYASKY 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91533g00001 194 CDD PMEI-like_3 38 192 - -
Stsc91533g00001 194 NCBIfam pectinesterase inhibitor domain 8 190 IPR006501 GO:0004857
Stsc91533g00001 194 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 190 IPR035513 -
Stsc91533g00001 194 Pfam Plant invertase/pectin methylesterase inhibitor 34 186 IPR006501 GO:0004857
Stsc91533g00001 194 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 190 IPR035513 -
Stsc91533g00001 194 SMART PMEI_2 31 186 IPR006501 GO:0004857
Stsc91533g00001 194 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 186 - -
Stsc91533g00001 194 FunFam Pectinesterase inhibitor 3 31 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91533g00001 Stsc-Chr91533 4119 5030 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91533g00001 25 187 Carbohydrate Esterase AT3G14310 28.994 6.26e-19 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91533g00001 - - gmx:100305900 263.077