Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91526g00003 ATGATGAATCTTCTTTCTCTATGTTGGAAGCCGTTTGGCCACGGCGGCGGTGATGCCGTCTCGGCCGCCGGCGGAAGGGAAGGCAAGGACGGTCTTCTATGGTTTCGCGATGTCGGTAGGTACGGCTCCGGCGAATTCTCGATGGCCGTCGTCCAGGCCAACCAGGTCCTCGAGGATCAGAGTCAGATCGAGTCCGGCCCCCTCGGAACCTTCGTTGGCGTCTACGACGGCCACGGCGGCCCCGACGCCTCCCGCTACGTCTGCGATAACTTGTTCCGCAACTTCCAAGCTGCGTCAGCTGATTCTCAGGGAGTTGTGACGCCGGAGACTATTCAAACTGCTTTCCGGAGAACTGAGGAAGGGTTCACTGCTCTTGTTTCTGATCTGTGGAGTACTCGGCCTCAAGTTGCCACTACCGGGACTTGCTGTCTGGTTGGAGTGATCTTCCAACAGACACTATTCGTGGCGAATCTTGGAGATTCCCGGGTTGTGTTGGGTAAGAAAGTTGGAAACACCGGTGGGGTAGCAGCGATTCAGCTGTCTACCGAACACAATGCGAATCTTGAGGACATTAGGCAGGAGCTTAAAGAAATGCACCCTGATGATCCCCAAATTGTTGTCCTTAAACATGGAGTGTGGAGAGTAAAAGGCATTATTCAGTTCTGCCAGAATGCTTATTAA 681 0.5389 MMNLLSLCWKPFGHGGGDAVSAAGGREGKDGLLWFRDVGRYGSGEFSMAVVQANQVLEDQSQIESGPLGTFVGVYDGHGGPDASRYVCDNLFRNFQAASADSQGVVTPETIQTAFRRTEEGFTALVSDLWSTRPQVATTGTCCLVGVIFQQTLFVANLGDSRVVLGKKVGNTGGVAAIQLSTEHNANLEDIRQELKEMHPDDPQIVVLKHGVWRVKGIIQFCQNAY 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91526g00003 226 SMART PP2C_4 32 226 IPR001932 -
Stsc91526g00003 226 CDD PP2Cc 46 220 IPR001932 -
Stsc91526g00003 226 Pfam Protein phosphatase 2C 68 190 IPR001932 -
Stsc91526g00003 226 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Stsc91526g00003 226 ProSiteProfiles PPM-type phosphatase domain profile. 42 226 IPR001932 -
Stsc91526g00003 226 SUPERFAMILY PP2C-like 54 219 IPR036457 -
Stsc91526g00003 226 Gene3D - 37 223 IPR036457 -
Stsc91526g00003 226 PANTHER PROTEIN PHOSPHATASE 43 222 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91526g00003 Stsc-Chr91526 18145 20735 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91526g00003 1 220 PP2C-type Phosphatase Gene Family AT3G17090 68.559 1.10e-108 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91526g00003 K01102 - qsa:O6P43_003685 381.333