Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91526g00001 ATGGGTTCATATCTGATCCCAACAGCACCACCAGCAACCACCACCACAACCCAATCACGTGACTCGCACGTGCACAGCCACAACAAGAAGAAGAAGCCTCATTCCAAGAACAACCACAAACAGCACCACCATCACCAACAAAACAACAACCGCCACGTCATCAACAAATGGAAATCACAAACACAACAACACCTCTACTCCACCAAACTCCGCCAAGCCCTCGCCGGATCCACCCTCTCCGCCGGCGGCAAATCCGTCCGCGAAACCGCCGACAGGGTTCTCGCCTCTGCCGCAAGAGGCAGAAGCCGGTGGAGCCGTGCCATGCTCACCAACCGTCTGAAGCTCAGCTTCATGAAGAAGAAGAAGAAGAATATTAAGAAGAGTAGAGTGGCGGCGGCGGTGGGGTCGGGAAGAAGAAGAAGCCGGTTGAACGTGGTTGGGCTGAAGGTAAAGACGGTTCCGGCGGTTCAGAAGAAAGTGAGATTATTGGGAAGGTTGGTTCCCGGGTGCAGGAAGGAACCTCTTCCGGTGATTCTAGAAGAAGCCATTGATTATATACCTGCTCTTGAGATGCAGGTTCGCGCCATGACTGCTCTCGCTAACTTGCTGTTAGCAAATTCTTCTTCTTCTTCTTCCTCTTCTTCATCTTCCACCGCTCATGCTCCTCCCACCTGA 675 0.5274 MGSYLIPTAPPATTTTTQSRDSHVHSHNKKKKPHSKNNHKQHHHHQQNNNRHVINKWKSQTQQHLYSTKLRQALAGSTLSAGGKSVRETADRVLASAARGRSRWSRAMLTNRLKLSFMKKKKKNIKKSRVAAAVGSGRRRSRLNVVGLKVKTVPAVQKKVRLLGRLVPGCRKEPLPVILEEAIDYIPALEMQVRAMTALANLLLANSSSSSSSSSSSTAHAPPT 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91526g00001 224 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 206 IPR036638 GO:0046983
Stsc91526g00001 224 MobiDBLite consensus disorder prediction 1 49 - -
Stsc91526g00001 224 CDD bHLH_AtIBH1_like 154 200 IPR044549 GO:0006355
Stsc91526g00001 224 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 58 207 IPR044660 GO:0006355
Stsc91526g00001 224 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91526g00001 Stsc-Chr91526 8399 9073 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91526g00001 54 199 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 48.750 1.71e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91526g00001 - - aip:107638969 233.032