Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91523g00003 ATGACCATTTTACCCCTCTTCCTTTTCTCCCTCCTCCTCCTCCCACCACCATCCTTCTCCCAACCACCACCATCATCATCATCATGCCCTCTTAACTTCACCATCCTCTCCACCCTCACCGGCACCGGAAACACCCCAACCTCTTACTCCTCCGCCACCGGAACCGCCGCCACAAACACCAAGTGCCAGTTCATCCGGCAATCCTTCCGCCTCCTCCAGTCCGACCTCCTCCGCCGCACCGACAACTTCCTGCCACCCCTCTCCGCCTCCCTCTCATGCTGGTCCCTCTTCCAATCCTACATCAACTCCTTCGACCCCTCCTTCCATATCCAACTCTCATGCGGATTCTCCAACGCTTCAATTTCACAAGGCTGCACCAACATCACCACAAGGCAACGCTTTGAAGCGTTGGTATCCTCTTCCGTGCTCCAAAATGTGGATTCTAGCTGCAACCAATCCCTTGAGAATAACTCGCCATGCGCACTCTGCACTACAAGCTTGTCTTCATTACCAGCCTCTGGTAACTCTCTTGGGAACCTCACTGATTGCACTTCTCTGCCTTCCATTTATGCTGCTGCTTTTAGCAACGGTTTTGGCCCTTCTGACCCTGGCACTGCAAAGTGTTTGTTCGACCTTGATTTCACACCTCTGGGTGATTCTAACAACAAGAACAAGAAGAAAAAGATTGTTGTTACTGTCGTTGTCACTGTTGTTTGTGTTTTGGGTTTGGTTTTTCTGGTTCTGGGATTGTGGAAGTTGAATGAAAAGTTGTGTGGTAAAAACGTTGCCGTTGCTGAAATGGGTTTGGTTTCTTCTAGTGTTGTTATGAATTTGGATTATTCTTCCATGGATCAGAGCACTATTACCTTGATAAGGTTCAGTATTGAGGATATAAAGAAAGCTACTAAGAATTTCTCAAGAGATAACATAATTGGAAGAGGGGGTTATGGCAACGTTTACAAAGGGTCGCTAAATGATGGAACCGAGGTTGCATTGAAGAGGTTCAAGAATTGTTCTGCTGCTGGTGATTCCAGCTTCAAGCATGAGGTTGAGGTTATTGCAAGTGTTAGGCATGTGAACCTTGTTGCATTAAGAGGATATTGCAGTGCCACAACAAATCTAGAAGGGTACCAAAGAATCATTGTTTGTGACCTAATGAAAAATGGTAGCCTTCATGACCATTTATTTAGCGGCGGTTCTAATTCTTCTAAGCTAAGTTGGCCAATTAGGAAGAAAATTGCAATAGGAACTGCTAAAGGAATTGCTTATTTGCATTACGGTGTTCAACCCTCGATAATTCATAGAGATATCAAAGCGAGTAACATTCTGTTAGACGAGAAATTCGAGGCTAAGGTGGCCGATTTCGGGCTAGCAAAGTTTAATCCTGAAGGGATGACACATATGAGCACAAGGGTAGCTGGAACAATGGGTTATGTTGCTCCAGAGTATGCTTTGTATGGTCAATTAACAGAGAGAAGTGATGTTTTCAGCTTTGGTGTTGTGCTTCTTGAGCTTCTAAGTGGGAAGAAAGCACTTTCAATTGGGAGTGACGGTCAACCTTCTGCGTTGACCGATTGGGCATGGTCATTGGTTAGAACAAACAAGGCCTTAGATGTGATTGAAGATGGAATGCCAGAGCTTGGATCACCCAAGATTCTTGAGAAGTATGTTTTGATTGGTGTCCTCTGTTCTCATCCTCAATTGTATGCTAGGCCTACTATGGATCAAGTTGTTAAAATGATGGAAACTGATCAAGATGTTGTTCAAGAAAATGAGGAATCGGTCGTGCCGGTTATACCGGACCGGCCGATCCCTCTGGTGGCCGGGAAGATTGATATCGAGAGATTGGTTAGTAGTAGCGGCCGCGGCGGCTCCGGTGGACTATCTAGTCCTACAGGGTACCAAGCATTTTATACAATTGGAAGTGATAAGCATTCTTCTGATAAGTCTAAGGAAGAAGAAAGTTCAAGCACTAAATATTTTAGTATTGAAGAATGA 1998 0.451 MTILPLFLFSLLLLPPPSFSQPPPSSSSCPLNFTILSTLTGTGNTPTSYSSATGTAATNTKCQFIRQSFRLLQSDLLRRTDNFLPPLSASLSCWSLFQSYINSFDPSFHIQLSCGFSNASISQGCTNITTRQRFEALVSSSVLQNVDSSCNQSLENNSPCALCTTSLSSLPASGNSLGNLTDCTSLPSIYAAAFSNGFGPSDPGTAKCLFDLDFTPLGDSNNKNKKKKIVVTVVVTVVCVLGLVFLVLGLWKLNEKLCGKNVAVAEMGLVSSSVVMNLDYSSMDQSTITLIRFSIEDIKKATKNFSRDNIIGRGGYGNVYKGSLNDGTEVALKRFKNCSAAGDSSFKHEVEVIASVRHVNLVALRGYCSATTNLEGYQRIIVCDLMKNGSLHDHLFSGGSNSSKLSWPIRKKIAIGTAKGIAYLHYGVQPSIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGKKALSIGSDGQPSALTDWAWSLVRTNKALDVIEDGMPELGSPKILEKYVLIGVLCSHPQLYARPTMDQVVKMMETDQDVVQENEESVVPVIPDRPIPLVAGKIDIERLVSSSGRGGSGGLSSPTGYQAFYTIGSDKHSSDKSKEEESSSTKYFSIEE 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91523g00003 665 Pfam Protein kinase domain 306 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91523g00003 665 MobiDBLite consensus disorder prediction 639 665 - -
Stsc91523g00003 665 Pfam SPARK 25 172 IPR043891 -
Stsc91523g00003 665 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 267 384 - -
Stsc91523g00003 665 SUPERFAMILY Protein kinase-like (PK-like) 280 582 IPR011009 -
Stsc91523g00003 665 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Stsc91523g00003 665 SMART serkin_6 305 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91523g00003 665 MobiDBLite consensus disorder prediction 644 665 - -
Stsc91523g00003 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Stsc91523g00003 665 ProSiteProfiles Protein kinase domain profile. 305 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91523g00003 665 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 43 657 - -
Stsc91523g00003 665 CDD STKc_IRAK 311 582 - -
Stsc91523g00003 665 Gene3D Phosphorylase Kinase; domain 1 269 384 - -
Stsc91523g00003 665 Gene3D Transferase(Phosphotransferase) domain 1 386 598 - -
Stsc91523g00003 665 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 386 589 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91523g00003 Stsc-Chr91523 19461 21484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91523g00003 26 648 Receptor kinase-like Gene Family AT2G48010 58.665 0.0 703
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Stsc91523g00003 Pkinase 6.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91523g00003 - - gmx:100800760 807.749