Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc91518g00001 | ATGGAAGATAGAGATTATTTTTGTTCAACAAACTCATCAATAAGAGATGGAAATGGAAGTAAAAGCAGGAGCAAAAATCCTATTAAGACGAAGCCGAAGATTCAAAGAGAGAAACAACCAAACAAACCCTACAAAGGAATAAGGATGAGGAAGTGGGGGAAATGGGTGGCGGAGATTAGAGAACCTAACAAGAGGTCAAGGATATGGTTAGGCTCCTACATGACACCGGTAGCGGCGGCGCGAGCATACGACACGGCCGTGTTCTACCTTCGCGGGCCGTCGGCGCGGCTCAACTTCCCGGAGTTGTTGTTCCAAGATCAAGAAAGGAAAGATGATGGTGGTGGCGGTTGTTTGTTGCAAGAACGTGACATGTCAGCTGATTGCATAAGAAAAAGAGCAACACAAGTTGGAGCAAGAGTTGATGCTATTCAAACAGCACTTAATCATGCATCTTCCAACCATAATTGTTCAACTACTCCTTCTCTCCTTCAGAAACCTGATTTGAATGAGTTTCCTAAACCTGATGATGAAGAAGATTCCCTTCACTTCTAG | 552 | 0.442 | MEDRDYFCSTNSSIRDGNGSKSRSKNPIKTKPKIQREKQPNKPYKGIRMRKWGKWVAEIREPNKRSRIWLGSYMTPVAAARAYDTAVFYLRGPSARLNFPELLFQDQERKDDGGGGCLLQERDMSADCIRKRATQVGARVDAIQTALNHASSNHNCSTTPSLLQKPDLNEFPKPDDEEDSLHF | 183 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc91518g00001 | 183 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED | 29 | 178 | - | - | |
Stsc91518g00001 | 183 | SUPERFAMILY | DNA-binding domain | 43 | 101 | IPR016177 | GO:0003677 | |
Stsc91518g00001 | 183 | MobiDBLite | consensus disorder prediction | 169 | 183 | - | - | |
Stsc91518g00001 | 183 | Pfam | AP2 domain | 44 | 92 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc91518g00001 | 183 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Stsc91518g00001 | 183 | MobiDBLite | consensus disorder prediction | 151 | 183 | - | - | |
Stsc91518g00001 | 183 | CDD | AP2 | 44 | 102 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc91518g00001 | 183 | Gene3D | AP2/ERF domain | 43 | 101 | IPR036955 | GO:0003700|GO:0006355 | |
Stsc91518g00001 | 183 | SMART | rav1_2 | 43 | 106 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc91518g00001 | 183 | MobiDBLite | consensus disorder prediction | 151 | 165 | - | - | |
Stsc91518g00001 | 183 | FunFam | Ethylene-responsive transcription factor 2 | 42 | 101 | - | - | |
Stsc91518g00001 | 183 | PRINTS | Ethylene responsive element binding protein signature | 44 | 55 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc91518g00001 | 183 | PRINTS | Ethylene responsive element binding protein signature | 82 | 102 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc91518g00001 | 183 | ProSiteProfiles | AP2/ERF domain profile. | 43 | 100 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc91518g00001 | 183 | MobiDBLite | consensus disorder prediction | 7 | 25 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc91518g00001 | Stsc-Chr91518 | 10166 | 10838 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc91518g00001 | 34 | 178 | AP2-EREBP Transcription Factor Family | AT2G23340 | 56.129 | 3.40e-50 | 158 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Stsc91518g00001 | AP2 | 6.1e-11 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc91518g00001 | K09286 | - | gmx:547642 | 214.542 |