Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc91516g00003 | ATGTGTCTCCAAATCTTATGTTTATTACTTATATTAAAAATAAATGCAGCAGAAGAATCATATGAATCTGAGTATAGAGTAATAAATCTTCCTGGGCAGCCTTCAAGCCCATCAGTTTCACACTTCTCAGGTTATATCACTGTCAATGAAGATCATGGGAGGGCCCTCTTCTACTGGTTCTTTGAAGCTCAATCTGAACCCTCCAATAAGCCCCTCCTTCTCTGGCTCAATGGAGGACCTGGATGCTCCTCCATTGGATATGGTGCAGTTGTTGAGATAGGGCCTCTTACAATCAACCAAAATGGTGATGGCCTGCATTTCAACACGTACTCTTGGTATCAAGAAGCGAATTTGTTATTTGTGGAGTCCCCTATTGGAGTTGGATTTTCTTACAGCAATACAACTTCTGATTATCTCACCATTTTAGAGGATAATTTTGTTGCTGAGGATGCCTACAATTTCTTGGTGAATTGGCTTCAACAATTCCCACAATTCAAATCCAGAGACTTTTTCATAGCTGGAGAAAGCTATGGTGGACACTATATCCCCCAGCTCGCGGAGCTAGTTTTCGATCGAAACAAAGATAAAAGCAGATACCCTTTTATCAATCTTAAAGGTTTCATTGTAGGGAATCCAAAAACAGATGATTACTATGACAATAAAGGGCTTGTGGAATATGCATGGAGCCATGCAGTTATATCAGACCAACAATATGACAAGGCAAAACAAGTTTGTGATTTCAAGAAATCTGAATGGTCTAATGAATGTAACATTGCCATGAATGAGATCTTCCAAGATTACTCAGAAATTGATATATACAACATTTATGCTCCGGCGTGTCGTCTTAATAATAACTCATCTAACAATAATCATGGCCTGGAATCACTTGCAGAGATGATGAGAATTGGAAATAATAAGTATAAAAAAGTAAAGAGGATGAGAATTTTTGAAGGGAATGATCCATGCTATTCAACATATGCAGAGGAATATTTCAATAGGGTAGATGTTCAATCATCTTTTCATGCAAATATCAGAGGAGCAAACACTAAAGCAGCATGGAAAGTCTGCAATGATTCCATATTGAGGACTTACAATTTCTCTGTCTTTTCGGTCCTACCAATCTACACCAAACTCATCAAGGGTGGCCTTAAAATATGGATTTACAGTGGAGACACAGATGGGAGAATACCAGTGATAGGGACAAGGTATTGGGTTGAAGCTCTGGGATTATCTCTGAAGTCCAGTTGGCAGAACTGGTACCATGATAATCAGGTTGGTGGAAGGATAGTGGAATATGAAGGGGTAACATATGTGACAGTAAGAGGGGCAGGTCACTTGGTACCACTAAACAAACCAAGTGAGGCTCTCTCACTCATTCGTTCTTTCCTTTCTGGCCAGCATCTCCCTACTCATGCCCACTAA | 1422 | 0.3966 | MCLQILCLLLILKINAAEESYESEYRVINLPGQPSSPSVSHFSGYITVNEDHGRALFYWFFEAQSEPSNKPLLLWLNGGPGCSSIGYGAVVEIGPLTINQNGDGLHFNTYSWYQEANLLFVESPIGVGFSYSNTTSDYLTILEDNFVAEDAYNFLVNWLQQFPQFKSRDFFIAGESYGGHYIPQLAELVFDRNKDKSRYPFINLKGFIVGNPKTDDYYDNKGLVEYAWSHAVISDQQYDKAKQVCDFKKSEWSNECNIAMNEIFQDYSEIDIYNIYAPACRLNNNSSNNNHGLESLAEMMRIGNNKYKKVKRMRIFEGNDPCYSTYAEEYFNRVDVQSSFHANIRGANTKAAWKVCNDSILRTYNFSVFSVLPIYTKLIKGGLKIWIYSGDTDGRIPVIGTRYWVEALGLSLKSSWQNWYHDNQVGGRIVEYEGVTYVTVRGAGHLVPLNKPSEALSLIRSFLSGQHLPTHAH | 473 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc91516g00003 | 473 | FunFam | Carboxypeptidase | 371 | 465 | - | - | |
Stsc91516g00003 | 473 | ProSitePatterns | Serine carboxypeptidases, serine active site. | 172 | 179 | IPR018202 | GO:0004185 | |
Stsc91516g00003 | 473 | Gene3D | - | 322 | 360 | - | - | |
Stsc91516g00003 | 473 | ProSitePatterns | Serine carboxypeptidases, histidine active site. | 435 | 452 | IPR033124 | GO:0004185 | |
Stsc91516g00003 | 473 | SUPERFAMILY | alpha/beta-Hydrolases | 27 | 468 | IPR029058 | - | |
Stsc91516g00003 | 473 | FunFam | Carboxypeptidase | 320 | 468 | - | - | |
Stsc91516g00003 | 473 | Pfam | Serine carboxypeptidase | 31 | 465 | IPR001563 | GO:0004185|GO:0006508 | |
Stsc91516g00003 | 473 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 108 | 120 | IPR001563 | GO:0004185|GO:0006508 | |
Stsc91516g00003 | 473 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 121 | 131 | IPR001563 | GO:0004185|GO:0006508 | |
Stsc91516g00003 | 473 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 158 | 183 | IPR001563 | GO:0004185|GO:0006508 | |
Stsc91516g00003 | 473 | PRINTS | Carboxypeptidase C serine protease (S10) family signature | 435 | 448 | IPR001563 | GO:0004185|GO:0006508 | |
Stsc91516g00003 | 473 | Gene3D | - | 371 | 465 | - | - | |
Stsc91516g00003 | 473 | PANTHER | SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE | 28 | 452 | IPR001563 | GO:0004185|GO:0006508 | |
Stsc91516g00003 | 473 | FunFam | Carboxypeptidase | 21 | 282 | - | - | |
Stsc91516g00003 | 473 | Gene3D | alpha/beta hydrolase | 19 | 291 | IPR029058 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc91516g00003 | Stsc-Chr91516 | 9313 | 12277 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc91516g00003 | 353 | 468 | Calmodulin-binding Proteins | AT2G22960 | 31.624 | 3.03e-14 | 69.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc91516g00003 | K16297 | - | gmx:100792930 | 773.467 |