Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91509g00002 ATGTTTACGAATGCTGCCGAGGAGAACATTAAGAGCTTTAAAGTTTACGTTGCTGAGTTAAAAGAATTAGTGGCAAAACTGTATTACCAGAAGCATCTTCTTATTTGCCAGGTTTTGGAGCTCGAGGCTAACAAGTATGCAACCGAAGAAACAGATACAACTGGTGGATCTCCAGTACCGTGGGAGTTTCTATTTGAACAGCAGAGACAGCAAATTATCATGTTATGGCATTTGTGCCACATTTCTCTGGTGCATAGGACACAGTTTTATCTTTTGTTAAGGGGAGATCCTTCTGATCAGATATATGCGGAAGTTGAATTTAGAAGATTGACATGGTTGGAGCAGCACCTGGCAGAACTTGGGAATGCTAGTCCTGCACTTCTCGGTGATGAGCCTGCAGACTATGTTTCAGCAAGCATTAGAGCTCTTAGGCAAGAAAGAGAGTACCTAGCTAAGAGGGTAAACTCTAAACTTACAGCACAAGAGAGGGAACTAGTTTATGCTGAATGGGAAGTTCCTCCAGGAGGAAAAAAGCAAAGGAGATTGGAATTCATTAACAAATTGTGGAGTGACCCTTACAATATTCACCATGTGCAAGAAAGCGCTCAAGTTGTAGCGAAGCTCATTGATTTCTGCGGTGATGAAAATAGCAAGGACATGTTTGAATTAAACTTTGCAGGCCCTTACACTGAGAAAACATCAGGATTTGAGCAGGCTATCCAAGGCTATGCTATTCACGTCCTTTCCTTGACTTACCAAAAGGTTCCTAGAGCTGTGCTTGCTGAGGCAATCAACATAGAAGGTCTATCCTTGGACAAATTCCTCGAACGCCAAGTAGCTAACTATGGTTGGGCAATAGAGAAGACCCAAGGCAAGGGTCATGAATTTAATGACCCAGTTTTGAAGAAAAACTCCTCAGATAGTTTTTGTGTTAATGAGGCTGGCAAGCATGAAATATTGTTTCATTACCAGTGCATTATGAGATTTCTCACTGAAACTAGAAAACTGCCTCTCATATGGCACGAATCACTTCTTGCATTTGTGCACAGGTTTCTTACAACTGATACTGTCAACATGGTGTTAGGCAAGAAGCTTGGTCCTGACTTGGTTGAAAGGCTGAAGATTTCTCTTCTTTCTGCTGAAGCTCTGGTTGTTGATGCTGAGCACAAGCAACTAGAAAATCAAGCTGTGAGGGAGTGGCTCAATTCTCTTAGAGATGCTCTTTATGTTGCTGATGACTTTCTTGATGATGTTCTCACCAAAGCTGCTACTCAAAAGGAGGTACGTTCTTTCTGGCCCAGTTTCCTCCTCAACCGTGATAGGGACATGGTAGATAAGATTGAAGGGGTGGTTAGAAGGATAGAATTTCTTGTTAAACAAAAAGATTTCCTTGGTCTTCAAACGAATACCAAGGATAATAACTTGTCATCATCATCATGGAGAGCATCCACATCTCTGATGGAAGGGAACATATATGGCAGGGAGGATGATCAACAAGCTTTAATCAAAATAATGAATGACAACAGTGAAAGTCAGTTATCTGTGATTCCTATTGTTGGCATGGGTGGAGTTGGTAAAACAACCTTAGCAAAGTGGCTGTATAGTGATGTGAAGGGATTTGATTTGAAAGCATGGGTTTGCATCTCAGAAACATTTGATATTGTTGAGATTACAAGGACAACCATAGAGGAAATTACTAAAAGTACTTGTACCTTTCGGAGTTTAAATTCTCTTCAGAATGAATTGCAGAAAATGTTGTTGGGAAAGAAGTTCTTTATTGTTCTAGACGATGTATGGAGCGATGATGCTGATAAATGGAAGCAATTTATTACTCCTTTTCAATCTGGAGCTAAGGGTAGCACAATTCTTCTAACAACTCGCATTAAAGAGGTTGCTTCAGTAGTTCAAACATGTCCCTCTTGGATTCTTAATGGGTTGTCGGAAGATTATTGTTGGTTACTGTTTGCAGACAATGCATGTTTTCCGGAGTCAAACGGGAATTCAACATTGGAGGAAATCGGTAGAAAGATTGTCAACAAGTGTAAGGGATTGCCATTAGCGGTGGAAACACTTGGGCGCTTGTTGCGAGCAAAGGACGATTTTAAGGAATGGAGTGCTGTTCTAACAAGTGACATCTGGAAATTTTCTATGAAAAATAGTAAAATTATTCCAGCATTGTTAATAAGCTACTTCCAGCTCCCTGCCTATATAAAGCGTTGTTTTGTTTATTGTTCATTGTATCCCAAAGATTACTGTTTCGAAAAAGATAAACTAATCTTGTTGTGGATGGCTGAAGATCTTTTAAGACAGCCAAAGAGAGGAGAGAGTTTAGAAGAAGTCGGTTGCGAGTGTTTTGAAGAATTACTCTCCAGGTTATTTTTTAAACAATATCAGAAATCTTATAAGATGCATGATCTATTGCATGACCTTGCATTGTTCCTTGCTGGAGACTTCTACTGCAGATCAGAAGAGCTTGGTAGAGATGAAGGTTTGAATCCTCTGACTCGTCATTTGTCCTTCGAAAGCTTGAGTCCTCTGGTCTCAAAAAATTCAGATTCCATCAACAAGGTTGAATCTTTAAGGACACTCTTGGCACTCAGTTTCTCTTCTCAATCAAACAACTTTGATGATGCAACATGTATCCTAATATCAAAACTCAAACACGTGAGAGTCCTGTTGTTCCATTTATTCAAAGGACTTAATGTGTTGCCTGAATCAATAGGTGAATTGATCCACTTGCGATATTTGGATATCTCTGAGACAAGTATTCGGGCACTGCCGGAATCATTGTGTAACTTGTACAATCTGCAAACGTTGAAGCTTTCCAAGTGTTGTAACTTGACTAGATTACCTAATGGCATGCATAATCTAGTGAATTTGCGACATCTTAATGTTTCAGGTGCCCCTTTAGAAGAGATGCCTGGCGGAATGAGCAAACTGAAAAACTTGCATATTTTAACTGACTTTGTGGTGGGCAAGAATAAAGACAATGGTATCCAAGAATTAGGAGGACTGTCAAATCTTCATGGATCACTTGAGATTAAGAAAATAGAGAATGTTGTTGACATCAAAGAAGCAAAGAGAGCAAGGATCATGGATAAGAGGCACATTGACTGCCTTCAGTTGCAATGGTCTTCGAGTGGCGATATTGTTTCAAACACACAAAACGAAAGAGATATACTCGATAGCTTGCAGCCGCACAATGACTTGAAAGAATTGAGAATCAAGGGATACAAGGGTACAATATTTCCAAATTGGGTTGGATATTGTTCCTACAGCAATATGACTTGTATATCTTTATCTTCTTGCAACAATTGCTGCATGCTGCCTTCACTTGGAGAGCTTCCATCTCTTCAGTCCCTCAGCATCAAAAGCTTTGGTCAGCTCAAGATTATTGGCCATGAATTTTACAAGAATGAAGCAAGCACTCATAATTCTTCACCTATTGCACCCTTTCCCTCACTGCATAGCTTGGATTTCCAGGATATGCCATGTTGGGAGGTCTGGCACTCATCTGGCCCAGAAGCTTTTCCTCAACTCAAGAGGCTTCAAATACATGGTTGTCCCATGTTGAAGGATGGTATTCCTAATTTCATAATCCAGAGATTTATCTCTTTATTGTCAGAGGCTCCGGAAGTTCGCAGGTTAGATGTAAGAGAAGATCATACAGGAGGGTCTCAAGAGCTATCTTTTTCTGGGAATACCTTAACAATTAAGGGGTGTGAGTCATTGGTGGAGTTTGCATTTCAGGAAATGACCATCAACCACTTTACTTATCTCCAACTAATAGAATTATCAGGGTGTTCATCTGCTATTTCCTTCCCAGGCAATTGTTTACCGAAATCTTTGCAAATGCTGACAATCCTCAAATGCCAAAAACTGGAATTTCCACAGCAACAGCACCAGAAGTATGATTTGGTAGGGCTATTAATATATTCTAGCTGTGATTCACTGACCTCATTGTCGTTGGATGCCTTTCCCAATCTCGAGTTTCTTGACATGTTCGGGTGTAAAAGTCTTGAATCAGTTTCAATGTCACTGCCACAAGAAGCTGCTCTTGATAGTCTCCCCAAGAATGGGTGCTCCAATTTGACTCATTTATATTTCAGAAACTGCTCCAAGTTGAAGGTATTGCCTTGTCACATGAACACTCTTCTTCCAAATTTAGAGCGTTTCCAGATACAAGGTTGTCCAGAATTGCATGAGTTTCCAGAGGGCGGTTTGCCACCTAACTTGAAAGTGCTTTCTGCTAGAAAGAGCCTTCTATCATCAGTGGGAAGCTTCAACTCCCTCAATGATCTCACCATTGAAGGTGATGACTGTGACAGAGTAAAGTCATTCCCCGAGTTGGGTTCGCTGCCTCACCTTCCCTCCCTTACCTTTCTAAAGATATGGAGGTTTCTTGATCTCGAGACGTTGGAGTGCAACGAGCTTCTCCGCCTCCCCTCCCTCCAAGAATTATACATTGAAAGGTGTCCGAAGCTGGAGAGTATGGCAGGAGAAAAAATGCCTCCCTCTCTGCTACAACTTTATGTGTATGAATGCCCTTTGCTGGAAGAACGCTGCAAGAAGAAGTACCAGCAAATTTGGCCCAAAATTTCTCACATCCCCAGCATTGGTTATGGCGTCACATATTTGGTAAATTAA 4647 0.4078 MFTNAAEENIKSFKVYVAELKELVAKLYYQKHLLICQVLELEANKYATEETDTTGGSPVPWEFLFEQQRQQIIMLWHLCHISLVHRTQFYLLLRGDPSDQIYAEVEFRRLTWLEQHLAELGNASPALLGDEPADYVSASIRALRQEREYLAKRVNSKLTAQERELVYAEWEVPPGGKKQRRLEFINKLWSDPYNIHHVQESAQVVAKLIDFCGDENSKDMFELNFAGPYTEKTSGFEQAIQGYAIHVLSLTYQKVPRAVLAEAINIEGLSLDKFLERQVANYGWAIEKTQGKGHEFNDPVLKKNSSDSFCVNEAGKHEILFHYQCIMRFLTETRKLPLIWHESLLAFVHRFLTTDTVNMVLGKKLGPDLVERLKISLLSAEALVVDAEHKQLENQAVREWLNSLRDALYVADDFLDDVLTKAATQKEVRSFWPSFLLNRDRDMVDKIEGVVRRIEFLVKQKDFLGLQTNTKDNNLSSSSWRASTSLMEGNIYGREDDQQALIKIMNDNSESQLSVIPIVGMGGVGKTTLAKWLYSDVKGFDLKAWVCISETFDIVEITRTTIEEITKSTCTFRSLNSLQNELQKMLLGKKFFIVLDDVWSDDADKWKQFITPFQSGAKGSTILLTTRIKEVASVVQTCPSWILNGLSEDYCWLLFADNACFPESNGNSTLEEIGRKIVNKCKGLPLAVETLGRLLRAKDDFKEWSAVLTSDIWKFSMKNSKIIPALLISYFQLPAYIKRCFVYCSLYPKDYCFEKDKLILLWMAEDLLRQPKRGESLEEVGCECFEELLSRLFFKQYQKSYKMHDLLHDLALFLAGDFYCRSEELGRDEGLNPLTRHLSFESLSPLVSKNSDSINKVESLRTLLALSFSSQSNNFDDATCILISKLKHVRVLLFHLFKGLNVLPESIGELIHLRYLDISETSIRALPESLCNLYNLQTLKLSKCCNLTRLPNGMHNLVNLRHLNVSGAPLEEMPGGMSKLKNLHILTDFVVGKNKDNGIQELGGLSNLHGSLEIKKIENVVDIKEAKRARIMDKRHIDCLQLQWSSSGDIVSNTQNERDILDSLQPHNDLKELRIKGYKGTIFPNWVGYCSYSNMTCISLSSCNNCCMLPSLGELPSLQSLSIKSFGQLKIIGHEFYKNEASTHNSSPIAPFPSLHSLDFQDMPCWEVWHSSGPEAFPQLKRLQIHGCPMLKDGIPNFIIQRFISLLSEAPEVRRLDVREDHTGGSQELSFSGNTLTIKGCESLVEFAFQEMTINHFTYLQLIELSGCSSAISFPGNCLPKSLQMLTILKCQKLEFPQQQHQKYDLVGLLIYSSCDSLTSLSLDAFPNLEFLDMFGCKSLESVSMSLPQEAALDSLPKNGCSNLTHLYFRNCSKLKVLPCHMNTLLPNLERFQIQGCPELHEFPEGGLPPNLKVLSARKSLLSSVGSFNSLNDLTIEGDDCDRVKSFPELGSLPHLPSLTFLKIWRFLDLETLECNELLRLPSLQELYIERCPKLESMAGEKMPPSLLQLYVYECPLLEERCKKKYQQIWPKISHIPSIGYGVTYLVN 1548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91509g00002 1548 Gene3D - 478 641 IPR027417 -
Stsc91509g00002 1548 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 484 744 IPR027417 -
Stsc91509g00002 1548 Gene3D - 344 460 - -
Stsc91509g00002 1548 SUPERFAMILY L domain-like 802 1206 - -
Stsc91509g00002 1548 Pfam Domain of unknown function (DUF3490) 65 226 IPR021881 -
Stsc91509g00002 1548 SUPERFAMILY "Winged helix" DNA-binding domain 234 291 IPR036390 -
Stsc91509g00002 1548 PANTHER DISEASE RESISTANCE PROTEIN RP 384 1241 IPR044974 GO:0006952
Stsc91509g00002 1548 Gene3D Ribonuclease Inhibitor 846 1256 IPR032675 -
Stsc91509g00002 1548 SUPERFAMILY L domain-like 1236 1534 - -
Stsc91509g00002 1548 Pfam Rx N-terminal domain 368 427 IPR041118 -
Stsc91509g00002 1548 Gene3D - 729 812 IPR036388 -
Stsc91509g00002 1548 PRINTS Disease resistance protein signature 585 599 - -
Stsc91509g00002 1548 PRINTS Disease resistance protein signature 681 695 - -
Stsc91509g00002 1548 PRINTS Disease resistance protein signature 515 530 - -
Stsc91509g00002 1548 PRINTS Disease resistance protein signature 931 947 - -
Stsc91509g00002 1548 SMART LRR_typ_2 910 933 IPR003591 -
Stsc91509g00002 1548 SMART LRR_typ_2 957 980 IPR003591 -
Stsc91509g00002 1548 Pfam NB-ARC domain 495 709 IPR002182 GO:0043531
Stsc91509g00002 1548 Gene3D - 645 728 IPR042197 -
Stsc91509g00002 1548 Gene3D - 228 309 IPR036388 -
Stsc91509g00002 1548 Gene3D Ribonuclease Inhibitor 1411 1532 IPR032675 -
Stsc91509g00002 1548 Gene3D Ribonuclease Inhibitor 1304 1410 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91509g00002 Stsc-Chr91509 11297 19108 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91509g00002 231 308 Eukaryotic Initiation Factors Gene Family AT4G33250 59.756 8.87e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91509g00002 - - adu:110277908 1371.3