Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91508g00005 ATGGGTTGCATATGTTTCAAACCAAAATCTGCAGGTGACTATGTTGCAGAGAATCACATAAAAAGGGCCAAGTCGAAGGCGTTGAACAAAAGGCATACGGGTACTGCTTCCCTTGGCCTCTTAGAATTTGGGAATGATGCCAGTACACGCTCTTCCACCACAATGGCAAAGCCACAGGATCAGGTGGCCGTAAAATCGACATTGTTCGGTGTCACGAACGGGGAGCGAGGAGCTCAGGTTATAGCTGGATGGCCATCTTGGCTCACTGCTGTTGCTGGGGAAGCCATTAGTGGTTGGATTGGACAAGGAACTTATAGTAGTGTTTATAGAGCTCGTGATCTTGAAACAAATAAGATTGTTGCATTAAAGAAGGTCCGATTTGCTACTATAGATCCTGAAAGCGTTCGCTTTATGGCAAGGGAGATTATTTTGCTGCGAAGGCTTGATCATCCAAATGTCATGAAGCTAAGGCATGATCACGTCAAGGGTTTCTGGTAG 498 0.4578 MGCICFKPKSAGDYVAENHIKRAKSKALNKRHTGTASLGLLEFGNDASTRSSTTMAKPQDQVAVKSTLFGVTNGERGAQVIAGWPSWLTAVAGEAISGWIGQGTYSSVYRARDLETNKIVALKKVRFATIDPESVRFMAREIILLRRLDHPNVMKLRHDHVKGFW 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91508g00005 165 PANTHER CELL DIVISION PROTEIN KINASE 99 158 - -
Stsc91508g00005 165 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Stsc91508g00005 165 Pfam Protein kinase domain 99 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91508g00005 165 Gene3D Phosphorylase Kinase; domain 1 95 162 - -
Stsc91508g00005 165 SUPERFAMILY Protein kinase-like (PK-like) 97 158 IPR011009 -
Stsc91508g00005 165 ProSiteProfiles Protein kinase domain profile. 94 165 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91508g00005 Stsc-Chr91508 22377 23171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91508g00005 100 157 Core Cell Cycle Gene Families AT3G48750 46.552 1.32e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Stsc91508g00005 Pkinase 2.9e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91508g00005 - - aip:107638508 212.616