Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91508g00004 ATGGAACATGATCTTGCAGGGCTTGCAGCAATACCTGGCATCAAGTTTTCTGAAGCACAGGTCAAATGTTATATGCAGCAACTACTTCGCGGTCTTGAGCATTGCCATGGTCGAGGTGTTATGCACCGTGACATCAAGGGCTCAAATCTTCTAGTTGATAATAATGGCCATTTGAAGATTGGCGATTTTGGACTTGCAACTTCGTTTAAGCCATCTAAGAGGCAGCCTTTAACAATTCGTGTTGTAACTTTGTGGTACCGACCGCCTGAACTTTTACTCGGCGCTACAGATTATGGAGCTTCCGTGGACTTGTGGAGTTCTGGTTGTATTCTTGCTGAATTGTTTTCGGGGAAGGCTATAATGCCTGGACGAACAGAGGTGGAGCAACTTCATAAAATTTTCAAACTTTGTGGGTCTCCTTCTGAAGAATACTGGAAGAAATCAAAGCTACCAAATACAACAATTTTCAAACCTCAACAACCATATCAACGCATTGTTTCTGAGACATTCAAGGATTTTCCTTCATCTGCACTGAGCCTATTGGAGTCACTTCTTGCTATAGAACCCCAAGATCGAGGAACAGCATCCTATGCACTTCAAAATGAGTTCTTCACCACAGTGCCACTTCCATCTGATCCATCAACTTTGCCAAAGTACTCACCAAGTAAGGAGTTTGATGCCAAACTTCGACAAGAGGAAGCTAGAAGAGCGAGATCAACAAATAAGGGGCATGAACAAGTATCAGTTAGGAGGAAGTTAAAAGCGTCTAAAAATGTTCTCGCTCCTGCTTCTAATACTGAATTGCAAGCACCAATAGAGAAGCGACAAAGGCAACCTAATTCTAAATCCATTAGCGAAAGCTACAATCCTAAAGAGGATGACAACTCTAGCTTCCTTCTTGAACTTGCAAAGCCAAGAGTTCTCGATAACTTCTCTCATTCTGGCCAGTCAGCGAATCCAAGTGCTTATGGTTCCTCAAACAATATGAATTTGAAAGAGGAAAATGTTCTTATTGGCCTCAATCATGACTTTGGATCAAGACACACTGAATTGAGTAAACAAACAGTATGTTGGCTTGACGGCACACAATATTCCAAATTTTCTAGTTCATTTGCAGTTCAAGGTGATGGCAAATCAATCGATTTTCTGGATGAATGGAAATCGCGTGAGAAGGACTTAAATCCTTTTGAAAAGGAACCTACCATGGGCTATGCTTCCAGAAACAAAAGTTTCCACTATTCTGGACCATTGTTGTCACAGGGGGGGAACATTGAAGTCATGCTCAAGGAGCACGAAAGGCACATCCAACAGGCTGTCCGCAAAGCTCGTTTGGACAAGGACAACAACATTAAAAGGGATAACAAGGAGAATGTCCTAACTGAATCACTACTATTACACCAAGTGTGA 1407 0.42 MEHDLAGLAAIPGIKFSEAQVKCYMQQLLRGLEHCHGRGVMHRDIKGSNLLVDNNGHLKIGDFGLATSFKPSKRQPLTIRVVTLWYRPPELLLGATDYGASVDLWSSGCILAELFSGKAIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPNTTIFKPQQPYQRIVSETFKDFPSSALSLLESLLAIEPQDRGTASYALQNEFFTTVPLPSDPSTLPKYSPSKEFDAKLRQEEARRARSTNKGHEQVSVRRKLKASKNVLAPASNTELQAPIEKRQRQPNSKSISESYNPKEDDNSSFLLELAKPRVLDNFSHSGQSANPSAYGSSNNMNLKEENVLIGLNHDFGSRHTELSKQTVCWLDGTQYSKFSSSFAVQGDGKSIDFLDEWKSREKDLNPFEKEPTMGYASRNKSFHYSGPLLSQGGNIEVMLKEHERHIQQAVRKARLDKDNNIKRDNKENVLTESLLLHQV 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91508g00004 468 MobiDBLite consensus disorder prediction 259 294 - -
Stsc91508g00004 468 FunFam probable serine/threonine-protein kinase At1g54610 3 244 - -
Stsc91508g00004 468 ProSitePatterns Serine/Threonine protein kinases active-site signature. 40 52 IPR008271 GO:0004672|GO:0006468
Stsc91508g00004 468 SUPERFAMILY Protein kinase-like (PK-like) 2 211 IPR011009 -
Stsc91508g00004 468 Pfam Protein kinase domain 14 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91508g00004 468 SMART serkin_6 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91508g00004 468 PANTHER CELL DIVISION PROTEIN KINASE 1 210 - -
Stsc91508g00004 468 Gene3D Transferase(Phosphotransferase) domain 1 3 244 - -
Stsc91508g00004 468 MobiDBLite consensus disorder prediction 231 252 - -
Stsc91508g00004 468 MobiDBLite consensus disorder prediction 231 295 - -
Stsc91508g00004 468 ProSiteProfiles Protein kinase domain profile. 1 204 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91508g00004 Stsc-Chr91508 18841 22354 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91508g00004 1 254 Core Cell Cycle Gene Families AT5G10270 52.549 1.10e-86 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Stsc91508g00004 Pkinase 2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91508g00004 - - aip:107638508 752.666