Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc91503g00002 | ATGCCGCGACTCATTTTCAAAGCTGTGCCATTTTTGCTACTAGTTTTACTATGCTCAAGTCGTTTAACTAAAGGGGTGGCACTTTCTCATTCTCTCACAAGGGACAGTGACACCCAGATTTTGCTGCAGGTGAAGAACAATGAGCTTCAAGACCAAAACGACAGTCTCAAAAGCTGGTCACTGGACACAAACCGCACTAGTAGTCCATGCAACTGGACCGGCATTACCTGCGACGCACGAAACCAATCGGTTCTCTCCATCGACCTCTCTCAAACCGGCGTCTACGGCTCTTTCCCATCCGGTTTTTGCCGCATTAACACTCTCCAAACCCTCAACCTCGCTTCCAACTTCTTAGGCGGCGCCATCTCCTCTCAATCACTCTCTCTCTGTTCCCACCTCCGCCTATTGGACCTCTCAGACAACCTCTTCGTCGGACCCCTGCCGGAATTCTCGCCGGAATTTTCTCAACTAACAGAACTTGACCTCTCAAAGAACAACTTCACCGGCGAAATTCCGGCGAGTTTCGGCCGGTTCCCGAACCTGAGCAAGCTCATTCTGTCAGGGAACCTTCTCAACGGAACCATTCCTCCATTCTTGGGCAACCTCAGTGCACTGGTTCATCTTGAACTCGCTTATAATCCATTGAAACCAGGATCATTACCTTCACAAATAGGAAACCTCTCTAACCTTGAAGTTCTGTTCCTCGCACAAAATAACCTCATAGGTGAAATACCAGACTCCATTGGAAACCTCATGAAGCTTCAGAACTTGGATTTGTCGCAGAACTCACTGTCAGGTATGATCCCAAGCAGCATTTCAAGACTGAAGAGTGTGAAGCAAATAGAGCTATTCTATAACCAGCTTTCCGGCGAAGTGCCACGTGGCATAGGAAATCTCACAAGTTTGGTTCGTTTGGACCTCTCTCAGAACGCTCTCACGGGAACACTGCCAGATTCAGTTGCTGCATTGCACCTCAATTCTCTTAACTTGAACGACAACCTTCTCAGTGGAGAAATCCCTATTACTCTTTCTTCCAACCCTAATTTGAATCAATTGAAGCTCTTCAACAACAGTTTCACCGGGAAACTACCCCAAGATCTCGGAAGATGCTCCGAGTTGGAGGAATTCGATGTCTCAACCAATGATTTCGCGGGAGAATTGCCCAAATACCTTTGCCAAGGGAACAAGCTTCACCATTTTGTCACCTTCACCAATCGGTTTTCCGGAACGATTCCTGATCAATACGGAGAGTGTGATTCCCTTGAATATGTCCGAATCGAGAATAACCAACTCTCCGGTCAAGTACCTCCGATGTTCTGGAGCCTCCCGAAGCTTCAGCTTCTTCAAATGGATAACAACAGGTTCGAAGGCTCTGTCTCTTCTTCCATTTCCAGCGCCAGGGGAATCACTGTTCTTCTTTTATCCGGTAACAGCTTCTCAGGGAATATTCCGAAGGAAATTTGTGAACTCGATCAGCTTGTGAAGATTGACATCAGCGAAAACCGGTTTTCCGGTGAAGTTCCCAGTTGCATAACAGGGTTGAAAAGGTTGCAGAAGCTTAGGATGCAGAATAACGCGTTCACCGGTGATATTCCCGGTAATGTGAGCTCATGGACCGAGTTGACTGAGTTGAACTTGTCTCATAACCAATTCTTCGGTTCAATCCCGCCAAAAATCGGTGACTTGCCGCAGTTGACTTACCTTGACCTCGCCGGAAATTTGCTAAGAGGTGAGATTCCGGTGGAGCTGACGAAACTCACACTCAATGAATTCAATATATCTGACAACAAATTGTACGGAGAAGTTCCTTCAGGTTTCAACCACCAAGTTTACTTGTCAGGTCTTATGGGAAACCCTGGTCTCTGTAGCCTAGTTATCAAAGAACTTTCTCCTTGTTCCAAACGCAGACCATTTTCCAAAATTGCTATACTTGCTTTATCTGCATGTGTGGTGCTCCTTCTGCTGTCTTTGCTCTATTTCTTGAAGACAACAAACTCAATTCATTTTGTTGCCAAGTCCAAGCGTTCATTCAAGACAACAGCTTTCCAACGGGTTGCTTTCAACGAAGAAGATATATTCCCCTTGTTAACTAATGACAATGTGATTGCTTCTGGAAGTTCCGGTCAGGTTTACAGGGTGAACCTCCCCAAGACGGGTCAGAAAGTGGCGGTGAAGAAGCTCTGGGGGGGAGGAAGGCAAGAGCAAGACAGAGAGACTGAATCGGTGTTCAGGTCGGAGATTGAGACGTTGGGGACAATCCGCCATGCTAACATTGTGAAGCTGCTGTTCTGTTGCAGTGGTGATGATTTCAGGATATTGGTGTATGAGTACATGGAGAATGGAAGCTTGGGTGATGTTTTGCATGAGGACAAGTGTGGCGAGTTGTTGGATTGGAACAAGAGGTTTGAAATTGCTGTGGGTGCGGCTCTGGGGTTGGCTTATTTGCACCATGATTGTGTCCCTGCCATAGTTCATAGGGATGTGAAGAGCAATAACATATTGCTTGATCATGAGTTTAGGCCTCGTGTGGCGGATTTTGGGCTTGCTAAGACCTTGCAGCATGAGGCTGGTGAGGGAGGTGCCGGTGCTGGTGCCATGTCCATGGTTGCTGGATCATATGGTTATATTGCCCCAGAGTATGCTTATACGCTCAAAGTAACTGAGAAGAGTGATGTGTACAGTTTTGGTGTGGTTTTGATGGAACTGCTCACAGGCAAGAGGCCAAATGACCCTTCCTTTGGGGAGAACAAAGACATAGTGAGGTGGGTCACTGAGACTGCTTTGCTATCATCTCTTGATGGAGAAAATGGCAATATTGAGGGTGGTCACGATCATATTGATATCATGAGAAAGATTGTGGACCCAAGATTGAACCCTGCAACTTGTGATTATGAGGAGTTTGAGAAAGTTTTAAATGTGGCCCTACTTTGCACCTCAGTGTTTCCCATTAACAGACCCTCAATGAGAAGGGTGGTTGAATTGCTCAAGGACCATAAGCTGCCTCGTCCCAAGTTATGA | 3018 | 0.4652 | MPRLIFKAVPFLLLVLLCSSRLTKGVALSHSLTRDSDTQILLQVKNNELQDQNDSLKSWSLDTNRTSSPCNWTGITCDARNQSVLSIDLSQTGVYGSFPSGFCRINTLQTLNLASNFLGGAISSQSLSLCSHLRLLDLSDNLFVGPLPEFSPEFSQLTELDLSKNNFTGEIPASFGRFPNLSKLILSGNLLNGTIPPFLGNLSALVHLELAYNPLKPGSLPSQIGNLSNLEVLFLAQNNLIGEIPDSIGNLMKLQNLDLSQNSLSGMIPSSISRLKSVKQIELFYNQLSGEVPRGIGNLTSLVRLDLSQNALTGTLPDSVAALHLNSLNLNDNLLSGEIPITLSSNPNLNQLKLFNNSFTGKLPQDLGRCSELEEFDVSTNDFAGELPKYLCQGNKLHHFVTFTNRFSGTIPDQYGECDSLEYVRIENNQLSGQVPPMFWSLPKLQLLQMDNNRFEGSVSSSISSARGITVLLLSGNSFSGNIPKEICELDQLVKIDISENRFSGEVPSCITGLKRLQKLRMQNNAFTGDIPGNVSSWTELTELNLSHNQFFGSIPPKIGDLPQLTYLDLAGNLLRGEIPVELTKLTLNEFNISDNKLYGEVPSGFNHQVYLSGLMGNPGLCSLVIKELSPCSKRRPFSKIAILALSACVVLLLLSLLYFLKTTNSIHFVAKSKRSFKTTAFQRVAFNEEDIFPLLTNDNVIASGSSGQVYRVNLPKTGQKVAVKKLWGGGRQEQDRETESVFRSEIETLGTIRHANIVKLLFCCSGDDFRILVYEYMENGSLGDVLHEDKCGELLDWNKRFEIAVGAALGLAYLHHDCVPAIVHRDVKSNNILLDHEFRPRVADFGLAKTLQHEAGEGGAGAGAMSMVAGSYGYIAPEYAYTLKVTEKSDVYSFGVVLMELLTGKRPNDPSFGENKDIVRWVTETALLSSLDGENGNIEGGHDHIDIMRKIVDPRLNPATCDYEEFEKVLNVALLCTSVFPINRPSMRRVVELLKDHKLPRPKL | 1005 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc91503g00002 | 1005 | SUPERFAMILY | Protein kinase-like (PK-like) | 697 | 995 | IPR011009 | - | |
Stsc91503g00002 | 1005 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 277 | 996 | - | - | |
Stsc91503g00002 | 1005 | SMART | LRR_typ_2 | 227 | 251 | IPR003591 | - | |
Stsc91503g00002 | 1005 | SMART | LRR_typ_2 | 442 | 466 | IPR003591 | - | |
Stsc91503g00002 | 1005 | SMART | LRR_typ_2 | 514 | 538 | IPR003591 | - | |
Stsc91503g00002 | 1005 | SMART | LRR_typ_2 | 562 | 586 | IPR003591 | - | |
Stsc91503g00002 | 1005 | SMART | LRR_typ_2 | 154 | 177 | IPR003591 | - | |
Stsc91503g00002 | 1005 | SMART | LRR_typ_2 | 299 | 323 | IPR003591 | - | |
Stsc91503g00002 | 1005 | SMART | LRR_typ_2 | 178 | 202 | IPR003591 | - | |
Stsc91503g00002 | 1005 | Pfam | Leucine rich repeat N-terminal domain | 35 | 78 | IPR013210 | - | |
Stsc91503g00002 | 1005 | Pfam | Leucine rich repeat | 253 | 312 | IPR001611 | GO:0005515 | |
Stsc91503g00002 | 1005 | Pfam | Leucine rich repeat | 155 | 215 | IPR001611 | GO:0005515 | |
Stsc91503g00002 | 1005 | FunFam | Probable leucine-rich repeat receptor-like protein kinase At5g63930 | 218 | 318 | - | - | |
Stsc91503g00002 | 1005 | SUPERFAMILY | RNI-like | 75 | 399 | - | - | |
Stsc91503g00002 | 1005 | Gene3D | Ribonuclease Inhibitor | 156 | 267 | IPR032675 | - | |
Stsc91503g00002 | 1005 | FunFam | LRR receptor-like serine/threonine-protein kinase HSL2 | 778 | 1004 | - | - | |
Stsc91503g00002 | 1005 | SUPERFAMILY | L domain-like | 321 | 633 | - | - | |
Stsc91503g00002 | 1005 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 823 | 835 | IPR008271 | GO:0004672|GO:0006468 | |
Stsc91503g00002 | 1005 | Gene3D | Ribonuclease Inhibitor | 325 | 637 | IPR032675 | - | |
Stsc91503g00002 | 1005 | Gene3D | Phosphorylase Kinase; domain 1 | 672 | 777 | - | - | |
Stsc91503g00002 | 1005 | FunFam | Leucine-rich repeat receptor-like protein kinase TDR | 320 | 634 | - | - | |
Stsc91503g00002 | 1005 | Pfam | Protein kinase domain | 699 | 912 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc91503g00002 | 1005 | Gene3D | Transferase(Phosphotransferase) domain 1 | 778 | 1001 | - | - | |
Stsc91503g00002 | 1005 | Gene3D | Ribonuclease Inhibitor | 268 | 324 | IPR032675 | - | |
Stsc91503g00002 | 1005 | Gene3D | Ribonuclease Inhibitor | 35 | 155 | IPR032675 | - | |
Stsc91503g00002 | 1005 | ProSiteProfiles | Protein kinase domain profile. | 696 | 1001 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc91503g00002 | 1005 | FunFam | LRR receptor-like serine/threonine-protein kinase ERL1 | 34 | 202 | - | - | |
Stsc91503g00002 | 1005 | PRINTS | Leucine-rich repeat signature | 299 | 312 | - | - | |
Stsc91503g00002 | 1005 | PRINTS | Leucine-rich repeat signature | 254 | 267 | - | - | |
Stsc91503g00002 | 1005 | SMART | serkin_6 | 696 | 1001 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc91503g00002 | Stsc-Chr91503 | 14202 | 18029 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc91503g00002 | 32 | 999 | Receptor kinase-like Gene Family | AT5G65710 | 56.397 | 0.0 | 1054 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Stsc91503g00002 | Pkinase | 1.8e-42 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc91503g00002 | - | - | gmx:100813889 | 1348.18 |