Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91500g00004 ATGGAAGAGGTAGTGTCAGTTTTCCCAAACCTAGGATTGGAGCTCCAAACAACAAGATCATGGGATTTCATGGGATTCACTGATGATTATGCATCCAATAAGCTTACACCTCCTTTTGATGGAAGAAACATCATCATTGGAATGTTTGACACAGGAATCTGGCCTGAATCAGAAAGCTTTAATGATGAAGGATTAGGTCCACCACCTAAACACTGGAAAGGAAAGTGCCAAACAGAACATAACTTCACCTGCAATAATAAGATCATTGGAGCCCGGTATTATCAGAGCTTTGATCTTGAAGACCAATTTAAATCAGCAAGAGATGAATCCGGCCATGGAAGCCATGCTGCATCGGTTGCGGCCGGAAGAGAGGTTGTAGGAGCCAATTACTTTGGCCTAGCTAAGGGAACTGCAAAGGGTGGAGCACCTAATGCCAGAATTGCTGTTTACAAAGTGTGTTGGAACATGGCATGCTATGCTGCTGATATCTTAGCTGCCTTTGATGATGCAATTGCGGATGGAGTCGACATTATATCGGCCTCATTCGCAGGATACTTGCAGTCGAGATTCTTGTTCAATCCAGTAGCAATTGGATCCTTTCATGCTGTGAATAATGGAATACTAACCATTGCAGCTGGTGGTAATCAAGGGCCACAAAGAGGAGGTTTAGCTAATCACCCTCCTTGGATACTAACTGTTGCAGCTAGCACCATTGATAGAAAATTTGTGACACCTTTGGTTCTAGGAAATGGAGATGTAATAACAGCAAATTCTATCAATACTTACAATGTTAAGAACATATCATATCCTTTGATTTGGGGAGGAGATGCTACAAACTTTTCAGCCAATTACATTCCCAGAGAGTCAAGTCTATGCTTCCCTGGCTCCTTAAATTCAGAGAGAGTTAAAGGAAACATTGTTCTTTGCGAAAACAGTGAGGGTGTCGCCGGAATCCAAATGGCGGCCGGGGCGGGGGTCATAGCCCCAATTAGACCACAACAGAACTTTGCTGAGAATTACCTCTTCCAAACAGCAAGTATCAGTAACAAGGAGATCTCTCAAGTATTAGAATACATCAAATCCTCCAATAACCCAAAGGCAAACATAATGTTTAGTAAAACCATGGAGGACATGGATGCTCCTTATGTAGCTAGCTTTTCAAGTAGAGGCCCCAACATTTTTAATCATGACATTCTCAAGCCTGATCTATGTGCACCTGGGGTAAATATTCTTGGAGCATGGTCTCCTGTTGCAACACCTTCCATGTTTAGTGGAACTGAGGATCTTAGGAGTGTTGAATACAATGTTGTCTCTGGAACTTCAGTGTCTTGCCCTCATGTTACCGGTGCTGCGGCTTATGTAAAGGCCACTCACCCAACCTGGTCCCCTGCAGCTATCAAGTCTGCACTGATGACCACAGCATATCCTATGGACCCAATAATGCATGAGTATGAGAATGAATTTGCATATGGTTCTGGCCATGTTAGACCAGTTTATGCAGTGAATCCTGGTCTAGTTTTGAATGCTACTAAGGAAGATTACAGTGACTTCTTCTGCAAGGAAGGTCCTAGAAATGGTTGTAAAAGCACCAAACCATTGAAACCATGGGATCTAAACTACCCTTCACTCTCACTAGCAGTGAAAGATGGGAATCAGATCAAGGGCAATTTCATCAGGGCAGTTACAAATGTTGGCACCCCAAAATCAACCTATAATGTTATCATTGATGTGCCACATATTCTCAAAGTCAAAGTGGAACCATCAACTCTTGCATTTTCTAAAGTTGGAGAAGAGAAATTCTTCTCTGTGGAAGTCACAGGGCCAAAGATATCACAGGTTCCAATAATCTCAGGTTCCATAACCTGGGTTCATGACAATCATAGAGTCAGAATCCCAATTGTAGTTTACACTGTGCTTCCATGGGATTCAGAATTTCATCATTAA 1944 0.4244 MEEVVSVFPNLGLELQTTRSWDFMGFTDDYASNKLTPPFDGRNIIIGMFDTGIWPESESFNDEGLGPPPKHWKGKCQTEHNFTCNNKIIGARYYQSFDLEDQFKSARDESGHGSHAASVAAGREVVGANYFGLAKGTAKGGAPNARIAVYKVCWNMACYAADILAAFDDAIADGVDIISASFAGYLQSRFLFNPVAIGSFHAVNNGILTIAAGGNQGPQRGGLANHPPWILTVAASTIDRKFVTPLVLGNGDVITANSINTYNVKNISYPLIWGGDATNFSANYIPRESSLCFPGSLNSERVKGNIVLCENSEGVAGIQMAAGAGVIAPIRPQQNFAENYLFQTASISNKEISQVLEYIKSSNNPKANIMFSKTMEDMDAPYVASFSSRGPNIFNHDILKPDLCAPGVNILGAWSPVATPSMFSGTEDLRSVEYNVVSGTSVSCPHVTGAAAYVKATHPTWSPAAIKSALMTTAYPMDPIMHEYENEFAYGSGHVRPVYAVNPGLVLNATKEDYSDFFCKEGPRNGCKSTKPLKPWDLNYPSLSLAVKDGNQIKGNFIRAVTNVGTPKSTYNVIIDVPHILKVKVEPSTLAFSKVGEEKFFSVEVTGPKISQVPIISGSITWVHDNHRVRIPIVVYTVLPWDSEFHH 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91500g00004 647 CDD Peptidases_S8_3 13 475 IPR034197 -
Stsc91500g00004 647 SUPERFAMILY Subtilisin-like 15 505 IPR036852 GO:0004252|GO:0006508
Stsc91500g00004 647 Gene3D - 511 638 - -
Stsc91500g00004 647 ProSitePatterns Serine proteases, subtilase family, serine active site. 439 449 IPR023828 -
Stsc91500g00004 647 PRINTS Subtilisin serine protease family (S8) signature 108 121 IPR015500 -
Stsc91500g00004 647 PRINTS Subtilisin serine protease family (S8) signature 438 454 IPR015500 -
Stsc91500g00004 647 PRINTS Subtilisin serine protease family (S8) signature 41 60 IPR015500 -
Stsc91500g00004 647 FunFam Subtilisin-like protease SBT1.5 43 249 - -
Stsc91500g00004 647 Gene3D - 239 376 - -
Stsc91500g00004 647 ProSiteProfiles Serine proteases, subtilase domain profile. 20 501 - -
Stsc91500g00004 647 Pfam Fibronectin type-III domain 537 635 IPR041469 -
Stsc91500g00004 647 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 635 IPR045051 -
Stsc91500g00004 647 Gene3D Peptidase S8/S53 domain 43 510 IPR036852 GO:0004252|GO:0006508
Stsc91500g00004 647 Pfam Subtilase family 41 475 IPR000209 GO:0006508|GO:0008236
Stsc91500g00004 647 CDD PA_subtilisin_like 246 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91500g00004 Stsc-Chr91500 11661 14980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91500g00004 1 640 Subtilisin-like Serine Gene Family AT5G59190 46.483 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91500g00004 - - lang:109355570 862.062