Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91500g00002 ATGGACTTAGTGAGTTTTGTGATGCTTCTTCTTCTTCTTCTTCTTTTGACTTGCACTACTCTTTATTCTCTCCATTTTCTCTTTGTAAGAAGAACCAAAGCAAACTGCAAGCTTCCACCAGGACCTTCTCCTCTTCCCATCATTGGAAACCTACATGAACTTGGAAATAATCCCCACCGTTCCTCTGCCATGCTTGCAAAGATTCATGGACCAATAATGACTTTGAAGTTAGGACAATTAACCACCATAGTGATCTCTTCGTCTGAAATGGCTAAAATGGTGCTTCAAACCTATGATCAGTTCCTATCGAACCGCACTGTTCCTGAGGCAGCAAGAGTTCACAACCACCATATTCATAGCATTGCCTTCATGCCTATGACACCTCTTTGGAGATCCCTTAGGAAGATATGCAACACTCAGTTATTCGCCAGCAAGACTATTGACGATGGCCAAGACTTGCGGCGCAAGAAAGTGAAAGAACTCCTTGGCGAGATCCATCAAAGTAGCCAATTTGGTGAAGCAGTGGATATTGGAGAAGCAGGTTTCAAGACTACAATAAATCTGTTGTCCAACACAATTTTTTCAATGGATTTGGTTCAATCTTCAGGTTCTACTGCACGGTTCAAGGATTTAGTTGCGAATATCACCAAAGAGAGTGGAAAACCGAACTTGGCTGATTATTTTCCAGCCTTGAGAATGGTTGATCCACAAGGAATTAGAGCACACAATTCTATTTATGCAGGGAAGTTATTGGATATCTTCCATGACTTGATTTACCAAAGAAAAACGCTAACATTGAAAACAGGTTCTGACACCAATAAGGACATGTTAGAAGCTCTTCTTAACATGTCTCAAGAGAATAGCAAAGAGATGAACAAAATAAATATTGAACATTTAATGCTGACCTTATTTGTTGCTGGAACTGATACAATCACATCTACATTAGAATGGGCAATGACTGAACTACTCAGCAATCCAAATACTATGAGAAAGGCTAAAAGGGAGCTTGAAGAAACCATTGGAAAGGGAAACCAAGTTGAGGAATCAGACATAGCAAGATTACCATATTTACAAGCAATATTGAAAGAGACATTTCGTTTGCACCCTTCAGTGCCATTTTTGCTCCCAAGAAAAGCAGACACTGATGTAGAAATCAATGGCTATACCATACCAAAAGGTTCACAGTTGCTAATCAATGTTTATGCTATTGGAAGGGATTCAAATGTGTGGAAGAATGACACAAATTTGTTCTCACCAGAGAGGTTCTTGGGATTAGAAACTGATGTTAGAGGGAGGCATTTTGAGTTGTTACCATTTGGTGGTGGCAGAAGAATATGTCCTGGTTTAACATATGCTATGAGGATTTTGTTCTTGATGTTAGGTTCATTGGTTAATTGCTTTGATTGGAAGCTTGAAAATGATACGAATGCTGAGGATATTGATAAGGATGAAGAATTTGGAATAACATTAAGAAAGTCTAAACCCCTTAGAATCATTCCAATCAAAATCAAATCCACTGCCTCTGTGCTGATATTCAAACCTTTCTACCGCCCCAGTGCTGCTACTTGCACAGGTGACATCCTGAAATGGAAGGAGAAACATCAGAACCTATAG 1614 0.3941 MDLVSFVMLLLLLLLLTCTTLYSLHFLFVRRTKANCKLPPGPSPLPIIGNLHELGNNPHRSSAMLAKIHGPIMTLKLGQLTTIVISSSEMAKMVLQTYDQFLSNRTVPEAARVHNHHIHSIAFMPMTPLWRSLRKICNTQLFASKTIDDGQDLRRKKVKELLGEIHQSSQFGEAVDIGEAGFKTTINLLSNTIFSMDLVQSSGSTARFKDLVANITKESGKPNLADYFPALRMVDPQGIRAHNSIYAGKLLDIFHDLIYQRKTLTLKTGSDTNKDMLEALLNMSQENSKEMNKINIEHLMLTLFVAGTDTITSTLEWAMTELLSNPNTMRKAKRELEETIGKGNQVEESDIARLPYLQAILKETFRLHPSVPFLLPRKADTDVEINGYTIPKGSQLLINVYAIGRDSNVWKNDTNLFSPERFLGLETDVRGRHFELLPFGGGRRICPGLTYAMRILFLMLGSLVNCFDWKLENDTNAEDIDKDEEFGITLRKSKPLRIIPIKIKSTASVLIFKPFYRPSAATCTGDILKWKEKHQNL 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91500g00002 537 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91500g00002 537 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91500g00002 537 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91500g00002 537 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91500g00002 537 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91500g00002 537 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91500g00002 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
Stsc91500g00002 537 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 13 502 - -
Stsc91500g00002 537 SUPERFAMILY Cytochrome P450 33 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91500g00002 537 Pfam Cytochrome P450 39 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91500g00002 537 Gene3D Cytochrome P450 27 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91500g00002 537 FunFam Cytochrome P450 76C4 30 499 - -
Stsc91500g00002 537 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91500g00002 537 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91500g00002 537 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91500g00002 537 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91500g00002 537 CDD CYP76-like 66 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91500g00002 Stsc-Chr91500 8229 11467 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91500g00002 1 502 Cytochrome P450 AT2G45550 46.154 3.77e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91500g00002 - - gmx:100805772 601.282