Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91494g00002 ATGTTGTCTTCAACGGAGGTACATGAGAAGCAGAACAAGAAAGAATCGTTCAACGCAGAAGCAGCCTCACTTCTTGTGAAAAACTTAACGGCGACTTTCGCTTCTGGCAAAACGCGAAGCTACGAATGGAGAGCGTCGCAGCTCAAAGCGCTTACCAAACTCCTCTCCGACGCTCACGAGCAGCAGATCGTCGACGCGCTTTACTCAGACCTCTCCAAACCGCCGCTCGAAACCGTCGCTTACGAGATTGCTATGTTAAAAAATTCATGCAAAGGTGCACTCAAGGAATTGAAACGTTGGATGACTTCAGAAAAGGTCAAAACTTCAATTTCAACCTTTCCTTCTACAGCAGAAATAGTATCCGAACCACTTGGGGTTGTGTTAATCATCTCTGCATGGAACTATCCGTTTTTGTTGTCACTTGAACCAATCATTGGAGCTATTGCAGCTGGTAATGCCGTGGTTCTAAAACCATCAGAAGTTGCTCCAGCTACATCATCACTGCTGGCAAAATTGCTAGGGGAGTACCTAGATAACTCATGTATAAGGGTTGTTGAGGGAGCGGTTGACGAAACATCTGCATTGCTGCAGCAAAAGTGGGACAAAATTTTTTATACAGGCAATGGAAGAGTGGCACGCATAGTGATGGCTGCTGCTGCTAAACATTTGACACCAGTAGTGCTGGAGCTTGGAGGAAAATCTCCAGCTGTTGTTGATTCAAATATTGATTTGAAGGTAGCGACTAGACGAATAATTGCTGGAAAGTGGTGTTGTAACAATGGACAAGCCTGCATTTCTCCAGATTATATCATTACAACAAAAGACTATGCTCCCAAGTTGGTGGATGCCCTCAAGACAGAATTGGAGAAGTTTTATGGAAAAAATCCGTTGGAATCAAAAGATTTGTCTCGTATAGTGAACTCCAATCACTTTGGTCGTTTGACAAAGCTCTTGGATGATGAGAAGCTTTCTGGGAAGATTGTATTTGGAGGCGAAAAGGATGAAAGCAAACTGATGATTAGCCCCACTATTCTATTGGATGTTCCACGAAATTCCCTGATGATGCGTGAGGAGATATTTGGTCCTTTACTTCCTATCATCACGGTTGATAAACTGGAAGAAAGCTTTGATGTGATCAATTCAGGAACAAAGCCTCTCGCTGCATATTTGTTTACTACCAACAATAAGCTCAAGGAACAGTTTGTAATGAATATTTCTGCCGGTGGTTTGGTTATCAATGACACTGCATTACATCTTGCCATAAACACACTACCTTTTGGTGGAGTTGGGGAGAGTGGAATCGGTGCATACCATGGAAAATTCTCATTTGATGCATTTAGCCACAAAAAAGCAGTTCTTTACCGTAGTTTTTTCGGTGATGCAGCAATAAGGTACCCGCCATACACAAACACAAAGATGAGATTGTTGAAGGCTCTAATTGGTGGTGGCTTACTTGGTATAATTCGTGCCCTGTTTGGGTTGTCCTAG 1488 0.4294 MLSSTEVHEKQNKKESFNAEAASLLVKNLTATFASGKTRSYEWRASQLKALTKLLSDAHEQQIVDALYSDLSKPPLETVAYEIAMLKNSCKGALKELKRWMTSEKVKTSISTFPSTAEIVSEPLGVVLIISAWNYPFLLSLEPIIGAIAAGNAVVLKPSEVAPATSSLLAKLLGEYLDNSCIRVVEGAVDETSALLQQKWDKIFYTGNGRVARIVMAAAAKHLTPVVLELGGKSPAVVDSNIDLKVATRRIIAGKWCCNNGQACISPDYIITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRIVNSNHFGRLTKLLDDEKLSGKIVFGGEKDESKLMISPTILLDVPRNSLMMREEIFGPLLPIITVDKLEESFDVINSGTKPLAAYLFTTNNKLKEQFVMNISAGGLVINDTALHLAINTLPFGGVGESGIGAYHGKFSFDAFSHKKAVLYRSFFGDAAIRYPPYTNTKMRLLKALIGGGLLGIIRALFGLS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91494g00002 495 PANTHER ALDEHYDE DEHYDROGENASE 21 482 IPR012394 GO:0006081
Stsc91494g00002 495 PIRSF ALDH 6 483 IPR012394 GO:0006081
Stsc91494g00002 495 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 31 450 IPR016162 GO:0016491
Stsc91494g00002 495 Pfam Aldehyde dehydrogenase family 18 452 IPR015590 GO:0016491
Stsc91494g00002 495 SUPERFAMILY ALDH-like 25 469 IPR016161 GO:0016491
Stsc91494g00002 495 FunFam Aldehyde dehydrogenase 232 432 - -
Stsc91494g00002 495 FunFam Aldehyde dehydrogenase 30 235 - -
Stsc91494g00002 495 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 228 235 IPR029510 GO:0016491
Stsc91494g00002 495 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 232 432 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91494g00002 Stsc-Chr91494 12859 18733 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91494g00002 83 495 Aldehyde Dehydrogenase Gene Family AT1G44170 73.123 0.0 653