Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91494g00001 ATGGAGTCTACAACAATGAGGAGAAGGTTTGATTCAGTAGAAGCTTCAGCGATGGTGAGTGATCTGAGAGTAACGTTTGATTCCGGCAAGACTCGGAGCTACGAGTGGAGAGCTTCTCAGCTGAAGGCACTAACAAAGTTGACCGAGGAAAACGAGCAAGCCATAGTTCAAGCTCTTAACTCGGACCTATCCAAGTGTGAAACCGAAGCTTACATTCAAGAGATTGCTATGTTAAAAAATTCATGCAAAGGTGCACTCAAGGAATTGAAACGTTGGATGACTTCAGAAAAGGTCAAAACTTCAATTTCAACCTTTCCTTCTACAGCAGAAATAGTATCCGAACCACTTGGGGTTGTGTTAATCATCTCTGCATGGAACTATCCGTTTTTGTTGTCACTTGAACCAATCATTGGAGCTATTGCAGCTGGTAATGCCGTGGTTCTAAAACCATCAGAAGTTGCTCCAGCTACATCATCACTGCTGGCAAAATTGCTAGGGGAGTACCTAGATAACTCATGTATAAGGGTTGTTGAGGGAGCGGTTGACGAAACATCTGCATTGCTGCAGCAAAAGTGGGACAAAATTTTTTATACAGGCAATGGAAGAGTGGCACGCATAGTGATGGCTGCTGCTGCTAAACATTTGACACCAGTAGTGCTGGAGCTTGGAGGAAAATCTCCAGCTGTTGTTGATTCAAATATTGATTTGAAGGTAGCGACTAGACGAATAATTGCTGGAAAGTGGTGTTGTAACAATGGACAAGCCTGCATTTCTCCAGATTATATCATTACAACAAAAGACTATGCTCCCAAGTTGGTGGATGCCCTCAAGACAGAATTGGAGAAGTTTTATGGAAAAAATCCGTTGGAATCAAAAGATTTGTCTCGTATAGTGAACTCCAATCACTTTGGTCGTTTGACAAAGCTCTTGGATGATGAGAAGCTTTCTGGGAAGATTGTATTTGGAGGCGAAAAGGATGAAAGCAAACTGATGATTAGCCCCACTATTCTATTGGATGTTCCACGAAATTCCCTGATGATGCGTGAGGAGATATTTGGTCCTTTACTTCCTATCATCACGGTTGATAAACTGGAAGAAAGCTTTGATGTGATCAATTCAGGAACAAAGCCTCTCGCTGCATATTTGTTTACTACCAACAATAAGCTCAAGGAACAGTTTGTAATGAATATTTCTGCCGGTGGTTTGGTTATCAATGACACTGCATTACATCTTGCCATAAACACACTACCTTTTGGTGGAGTTGGGGAGAGTGGAATCGGTGCATACCATGGAAAATTCTCATTTGATGCATTTAGCCACAAAAAAGCAGTTCTTTACCGTAGTTTTTTCGGTGATGCAGCAATAAGGTACCCGCCATACACAAACACAAAGATGAGATTGTTGAAGGCTCTAATTGGTGGTGGCTTACTTGGTATAATTCGTGCCCTGTTTGGGTTGTCCTAG 1464 0.4194 MESTTMRRRFDSVEASAMVSDLRVTFDSGKTRSYEWRASQLKALTKLTEENEQAIVQALNSDLSKCETEAYIQEIAMLKNSCKGALKELKRWMTSEKVKTSISTFPSTAEIVSEPLGVVLIISAWNYPFLLSLEPIIGAIAAGNAVVLKPSEVAPATSSLLAKLLGEYLDNSCIRVVEGAVDETSALLQQKWDKIFYTGNGRVARIVMAAAAKHLTPVVLELGGKSPAVVDSNIDLKVATRRIIAGKWCCNNGQACISPDYIITTKDYAPKLVDALKTELEKFYGKNPLESKDLSRIVNSNHFGRLTKLLDDEKLSGKIVFGGEKDESKLMISPTILLDVPRNSLMMREEIFGPLLPIITVDKLEESFDVINSGTKPLAAYLFTTNNKLKEQFVMNISAGGLVINDTALHLAINTLPFGGVGESGIGAYHGKFSFDAFSHKKAVLYRSFFGDAAIRYPPYTNTKMRLLKALIGGGLLGIIRALFGLS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91494g00001 487 PANTHER ALDEHYDE DEHYDROGENASE 15 474 IPR012394 GO:0006081
Stsc91494g00001 487 FunFam Aldehyde dehydrogenase 224 424 - -
Stsc91494g00001 487 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 220 227 IPR029510 GO:0016491
Stsc91494g00001 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 224 424 IPR016163 GO:0016620
Stsc91494g00001 487 SUPERFAMILY ALDH-like 15 461 IPR016161 GO:0016491
Stsc91494g00001 487 PIRSF ALDH 2 475 IPR012394 GO:0006081
Stsc91494g00001 487 Pfam Aldehyde dehydrogenase family 12 444 IPR015590 GO:0016491
Stsc91494g00001 487 FunFam Aldehyde dehydrogenase 23 227 - -
Stsc91494g00001 487 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 442 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91494g00001 Stsc-Chr91494 9348 18733 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91494g00001 75 487 Aldehyde Dehydrogenase Gene Family AT1G44170 73.123 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91494g00001 K00128 - gmx:100778722 788.489