Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91472g00002 ATGGGTGACAATGAAGACTCCAACAACAACAGCAATAGTGACATGATGCAAAGGCTTCAATCCTCATTCGGAACGACGTCGTCTTCTTCTTCTTCTTCATTCATCAAGCAGACACTTACCATGGAGCAGCTCACAATACCCCAATTCCAACAACAAATGCGTGCTAATAACAATAATCAGCAACAACATTTCTACGGTGTAGATGGAATGAAGCGTGCGGGTATACCACCGTCTCACCCGCACCAGATCCCGCCCATTTCCCCATACTCTCAGATCCCACGCTCCACGCTCACTCACCACCAAATGCCTTCACCTACACCCACTCACACCCGATCCCTATCCCAGCCATCCTTCTTCTCACTCGATTCTCTTCCACCGCTAAGCCCCTCTCCCTTCCGCGGCGGTGATTCCTCTACTTCAATCTCCGACCAAGCCTCCGCTGACGTCTCCATGGAAGATCGTGACGTCAGCAGCCACAACCACCAACAGCAGCAACACTCTCTCCTCCCTCCTTCTTCGCCTTTCTCATCTGCCCGGGGCAGCGCCAACCCTCTGCCTCCTCCTCGGAAAACGCATCGTCGCTCTAACAGTGATATACCGTTTGGATTCTCCACCATTTTGCAGTCGTCGCCGCCGCTGATTCCTCTGAAGAAGCCTGCGCAGCTTGTTAAGAAGGAGTCTGGTTCTTGGAGTAGCGCTGATCCCAATGCGGAGGGATCAGGGGAGAAGAAGCTCTCCCCTGAAGGTGAAGTTGTCGATGATCTTTTCTCTGCTTACATGAACTTGGATAGCATCAATGACGCGTTTAACAATAATTCCTCTGATGAGAAGAATGGTAATGAGATCATCATTAATAATAATCATAACAGTAATCGTGATGATTTGGATAGTAGGGCTAGTGGAACCAAGACTAGTAATAACAATGGTGGTGGTGATAGCAGTGATAATGAAGCTGAGAGTAGTGGCAACTCAATGATGAGTCAGAGTTGTGGGGAGAAGAGGGATGGTGTGAAGAAGAGGAGTGCTGCTGGTGAGGTTGTTGGCGGCGGCGTGGCTCCCTCGAGCCGCCACTATAGGAGTGTGTCTATGGATAGTTTCATTGGCAAGTTGAATTTCAATGATGAGTCACCTAGGTTGCCGCCTTCGCCTGGTTCCGCTCGGCCGCCTTCCTCCAATGGAATTGATGGGAGCACTGGTGCTTTCAGCTTGGAATTTGGGAATGGTGAGTTTAGTGGTCCTGAGTTAAAGAAGATCATGGCCAATGAGAAGCTTGCTGAGATTGCTATGATGGATCCTAAGCGTGCAAAGAGGATTCTGGCGAATCGGCAATCAGCTGCACGGTCCAAAGAAAGAAAGATGCGATACATTTCCGAGCTGGAGCACAAGGTCCAGACTCTACAAACTGAGGCCACCACACTATCTGCACAGCTTACTCTGTTGCAGAGGGATTCTGTTGGACTCACTAACCAAAATAGTGAGCTCAAATTTCGCCTTCAATCCATGGAACAACAGGCAAAACTTCGAGATGCTCTAAACGAGGCTCTCACTGCCGAGGTTCAACGACTAAAGCTTGCTACGGCCGAGCTGAACGGGGATTCACACCAATCCGGTTGCATGATTCCACAACATTCTGTCAACCCTATGATGTTTCAGCAGCAGCAACCTTCTACCACATCTCAACAAAACATTCATCTTCAACAACAGCGGCAGAATGGTAATGCCAACTCACAAACCGATCTAAAACAATCATAA 1752 0.4897 MGDNEDSNNNSNSDMMQRLQSSFGTTSSSSSSSFIKQTLTMEQLTIPQFQQQMRANNNNQQQHFYGVDGMKRAGIPPSHPHQIPPISPYSQIPRSTLTHHQMPSPTPTHTRSLSQPSFFSLDSLPPLSPSPFRGGDSSTSISDQASADVSMEDRDVSSHNHQQQQHSLLPPSSPFSSARGSANPLPPPRKTHRRSNSDIPFGFSTILQSSPPLIPLKKPAQLVKKESGSWSSADPNAEGSGEKKLSPEGEVVDDLFSAYMNLDSINDAFNNNSSDEKNGNEIIINNNHNSNRDDLDSRASGTKTSNNNGGGDSSDNEAESSGNSMMSQSCGEKRDGVKKRSAAGEVVGGGVAPSSRHYRSVSMDSFIGKLNFNDESPRLPPSPGSARPPSSNGIDGSTGAFSLEFGNGEFSGPELKKIMANEKLAEIAMMDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKLATAELNGDSHQSGCMIPQHSVNPMMFQQQQPSTTSQQNIHLQQQRQNGNANSQTDLKQS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91472g00002 583 MobiDBLite consensus disorder prediction 225 248 - -
Stsc91472g00002 583 MobiDBLite consensus disorder prediction 69 213 - -
Stsc91472g00002 583 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 431 494 IPR004827 GO:0003700|GO:0006355
Stsc91472g00002 583 MobiDBLite consensus disorder prediction 132 147 - -
Stsc91472g00002 583 FunFam probable transcription factor PosF21 432 485 - -
Stsc91472g00002 583 Coils Coil 449 483 - -
Stsc91472g00002 583 MobiDBLite consensus disorder prediction 197 211 - -
Stsc91472g00002 583 MobiDBLite consensus disorder prediction 161 180 - -
Stsc91472g00002 583 Pfam bZIP transcription factor 433 487 IPR004827 GO:0003700|GO:0006355
Stsc91472g00002 583 MobiDBLite consensus disorder prediction 271 355 - -
Stsc91472g00002 583 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 163 577 - -
Stsc91472g00002 583 Gene3D - 432 484 - -
Stsc91472g00002 583 MobiDBLite consensus disorder prediction 372 400 - -
Stsc91472g00002 583 CDD bZIP_plant_RF2 434 483 IPR044759 GO:0003700|GO:0006355
Stsc91472g00002 583 SMART brlzneu 429 493 IPR004827 GO:0003700|GO:0006355
Stsc91472g00002 583 MobiDBLite consensus disorder prediction 300 330 - -
Stsc91472g00002 583 SUPERFAMILY Leucine zipper domain 433 484 IPR046347 GO:0003700|GO:0006355
Stsc91472g00002 583 Coils Coil 512 532 - -
Stsc91472g00002 583 MobiDBLite consensus disorder prediction 551 583 - -
Stsc91472g00002 583 MobiDBLite consensus disorder prediction 88 124 - -
Stsc91472g00002 583 MobiDBLite consensus disorder prediction 271 290 - -
Stsc91472g00002 583 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91472g00002 Stsc-Chr91472 19308 23122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91472g00002 1 552 bZIP Transcription Factor Family AT4G38900 53.565 2.34e-162 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc91472g00002 bZIP_1 9.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91472g00002 - - aip:107628829 870.152