Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91472g00001 ATGGCCGCTTCTTCACTTTCTAACCTCTCTTCTCTCTCTTCCACCGCCGCCGCCACCACCACCACCACCACCACCTCCCTCTCCAAACCCTCCTCTCTCCCTCTCTTCCACAACAAAACCCTCCCTAAACCCACCACCACCACAACAACACGCGCCGCCACCAACTCCCCAATCCCCAAACCACAAAACTCCGTTCCCTTCTCCTTCTCCCATGACGACGAAAAGCCACGCGAAGAGTGCGGCGTCGTTGGAATCTACGGCGACCCCGAAGCCTCCCGCCTCTGCTACCTCGCACTCCACGCCCTCCAGCACCGCGGCCAAGAAGGCGCCGGGATCGTAACCGTCAACAACAACGTCCTTCAATCCATCACCGGCGTCGGCCTCGTCTCCGACGTATTCAACGAGTCCAAGCTCGACCAGCTCACCGGCTCCCTCGCCATCGGCCATGTCCGTTACTCCACCGCGGGACAGTCCATGCTCAAGAACGTCCAGCCTTTCGTCGCCGGCTACCGCTTCGGTTCAGTCGGCGTCGCTCACAATGGAAATCTCGTAAATTACCGAACCCTGAGGGCAAAACTGGAAGACAACGGTTCCATCTTCAACACCACTTCTGATACCGAGGTGGTTCTTCACCTCATCGCAACTTCGAAGCACAGACCCTTCATTCTGAGAATCGTTGACGCGTGTGAGAAGCTCGAAGGTGCGTATTCAATGGTGTTTCTTACAGAGGACAAGCTTGTTGCTGTTAGGGACCCGTTTGGGTTTAGGCCTTTGGTTATGGGAAGAAGAAGCAACGGTTCTGTTGTTTTTGCTTCTGAAACTTGCGCTCTTGATTTGATTGAAGCTACTTACGAAAGAGAAGTGTACCCTGGCGAGGTTATTGTTGTGGACAACAATGGAGTTCAGAGTCTCTGCCTTATGTCTCATCCTCAACCCAAACAGTGTATATTTGAGCACATTTACTTCGCTTTACCCAATTCTGTTGTGTTTGGTAGGTCAGTTTATGAATCTAGAAGGCAATTTGGCGAGATTCTTGCAACTGAGAGTCCTGTTGATTGTGATGTTGTCATAGCTGTGCCTGATTCCGGTGTTGTGGCCGCGCTTGGTTACGCCGCGAAAGCCGGCGTCCCCTTCCAGCAGGGGCTAATTAGGTCCCACTATGTTGGGAGGACCTTCATTGAGCCTTCTCAGAAGATTAGGGACTTTGGCGTGAAGCTTAAGCTATCCCCGGTTCGCGCGGTTCTAGAAGGGAAGAGAGTTGTGGTGGTGGATGATTCGATTGTGAGAGGAACAACATCATCAAAGATTGTGAGGTTGTTGAAGGAGGCTGGTGCCAAAGAGGTTCACATGAGGATTGCAAGCCCACCGATAATTGGTTCTTGTTACTATGGTGTTGACACTCCAAGCTCTGAGGAGTTGATTTCTAATAGGATGAGTGTTGAGCAGATTAGGGATTTTATTGGTTCTGATTCACTTGCTTTTCTTCCATTTGATAGCTTGAGGAATTTGTTGGGGAAGGAGTCCCCTAATTTCTGTTATGCTTGTTTCTCTGGGAATTACCCTGTTGAGCCAAGAGAACTTAAGGTGAAGAGGGTTGGTGACTTTGTTGATGATGGGTTGAATGGGAGTTTGGAAACCATTGATGGTGGCTGGGTTCAAGCAACAACACCACCACCACCAACAAAAACCCCTAAAGAGGAGAAGGCTGGTACCGTTTTTTGA 1722 0.507 MAASSLSNLSSLSSTAAATTTTTTTSLSKPSSLPLFHNKTLPKPTTTTTTRAATNSPIPKPQNSVPFSFSHDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVNNNVLQSITGVGLVSDVFNESKLDQLTGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEDNGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSMVFLTEDKLVAVRDPFGFRPLVMGRRSNGSVVFASETCALDLIEATYEREVYPGEVIVVDNNGVQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEQIRDFIGSDSLAFLPFDSLRNLLGKESPNFCYACFSGNYPVEPRELKVKRVGDFVDDGLNGSLETIDGGWVQATTPPPPTKTPKEEKAGTVF 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91472g00001 573 CDD PRTases_typeI 342 453 IPR000836 -
Stsc91472g00001 573 MobiDBLite consensus disorder prediction 1 69 - -
Stsc91472g00001 573 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 80 303 IPR029055 -
Stsc91472g00001 573 NCBIfam amidophosphoribosyltransferase 80 521 IPR005854 GO:0004044|GO:0009113
Stsc91472g00001 573 MobiDBLite consensus disorder prediction 1 73 - -
Stsc91472g00001 573 SUPERFAMILY PRTase-like 315 526 IPR029057 -
Stsc91472g00001 573 CDD GPATase_N 80 330 IPR035584 -
Stsc91472g00001 573 Hamap Amidophosphoribosyltransferase [purF]. 79 520 IPR005854 GO:0004044|GO:0009113
Stsc91472g00001 573 MobiDBLite consensus disorder prediction 548 573 - -
Stsc91472g00001 573 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 80 299 IPR017932 -
Stsc91472g00001 573 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 78 527 - -
Stsc91472g00001 573 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 80 521 IPR029055 -
Stsc91472g00001 573 Pfam Glutamine amidotransferase domain 158 277 IPR017932 -
Stsc91472g00001 573 Pfam Phosphoribosyl transferase domain 354 449 IPR000836 -
Stsc91472g00001 573 Gene3D - 339 503 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91472g00001 Stsc-Chr91472 14849 17145 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91472g00001 66 553 PRT Gene Family AT2G16570 84.756 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91472g00001 K00764 - gmx:100791919 936.791