Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91464g00004 GGATCCAAAGAAAGGAATGTAGGAATTATAGCTCCAATTGCAATTGGACTCATTGTAGGTGCAGACATCTTAGTAGGTGGTCCATTTGATGGTGCATCAATGAATCCAGAAGTGTCATTTGGTCCTGCTATTGTTAGTTGGTCATGGACTCCTCATTGGGTCTATTGGGTTGGTCCATTCATTGGTGCTGCCATTGCTGCCATTTTGTATGATAATATCTTCATTGGTGATGATGGTCAGGAACCCCTTTCAAGCACTAGTGACTACTAG 270 0.4259 GSKERNVGIIAPIAIGLIVGADILVGGPFDGASMNPEVSFGPAIVSWSWTPHWVYWVGPFIGAAIAAILYDNIFIGDDGQEPLSSTSDY 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91464g00004 89 Gene3D Glycerol uptake facilitator protein. 1 87 IPR023271 -
Stsc91464g00004 89 Pfam Major intrinsic protein 4 70 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc91464g00004 89 PANTHER AQUAPORIN-8 3 77 IPR034294 -
Stsc91464g00004 89 SUPERFAMILY Aquaporin-like 5 77 IPR023271 -
Stsc91464g00004 89 PRINTS Major intrinsic protein family signature 16 38 IPR000425 GO:0015267|GO:0016020|GO:0055085
Stsc91464g00004 89 PRINTS Major intrinsic protein family signature 53 73 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91464g00004 Stsc-Chr91464 19951 20221 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91464g00004 3 85 Major Intrinsic Protein MIP AT4G01470 79.518 5.97e-42 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91464g00004 K09873 - gmx:100788583 154.451