Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91459g00001 ATGTTTCAGTACATGAGAAAGATCAAGTTTCTCTCCTTATTACCATCATTACTATTGTTTCTGCTGCAACAACTTTTCTTCTTCACTTCCCCAGTCAACTCATACGTACCTATCGATTATTTTGCTGTCAACTGCGGCTATTCAGGAAACATCACCATTCATGATCGCAACTGGATTGGAGACGTTGACCCCAACTTATTCTCTACAATTGAATCATCATCATCACAGCCATCACTCATAACCGCTCATACAATTCCTACCTATTCTTCAGTTGATTCGGTTCCCTTTGGAACCGCACGCATTTTTCACTCTCAATTCACATACTCTTTCCCTCTCAAAACTCCCGGCCCAAAGTTCCTTCGTCTTCACTTCTATCCAACAACGTATCTCAACTTCACTCCCTACGACTCTCTCTTCTCTGTGACAGCTGGCACCTTCACACTTCTCAAAGATTTCAACGCTTCCCATTGGGTTCTCCAGGGAGGCGACGACGACACTGTCTCCAAAGAATACTGCATCAACGTTGAAGCAGGTGATAACGAGAGACTCACTCTCAACATAACCTTCATTCCCAGCACTCATGCCTATGCTTTCATCAACGGCATCGAGGTGGTGTCCATGCCTTCCTTCCTCTATTACACAGATCTTTCAAACGACACCGGCTTTGAGCTCGTTGGTCAAGGCACTGTCTCATACCAACTTCAAAGTGACAAAGCTCTCGAGACACTTTACAGAGTCAACGTCGGCGGCAGTCAGGTTCCAACCGCCAAGGATACCGGCATGTTCCGCTACTGGGACGACGATTTTACTCGCTACTTGGAGCAGCAGCATCCACATAGCATTCAGAGTGGCTTTGCAGTTCACCTGAACTACAGAAACAACACCGTCCCAAATTACACCGCACCTGAAGTTGTGTACTTAACTGCCCGAAGCTACGGTATGAATGAGACTGCGAATTACAATGTAACTTGGAACTTCCAGGTGGATTCGCAGTTCTATTACATGGTGCGGTTACATTTTTGCGAGTGGGACAAGAATATCCAGCACAGTGGAGACAGAGTCTTCGAGATCTTTATTGCTGACACCATGGCTGAAGAACTCGCAGATGTGATTCTATGGAGTGGCGGAGATCTAATTCCTACTCATAAAGACTACGCTGTGTTTATGATTTCCAAAGGAAACTTGTCCAAGAAAGTCAACCTTTCTGTTAAGCTCCAACGCAGGCGGTTGCTACAAGGAACCAGGATCAGTGATGTCATATTGAACGGCATCGAGATCTTCAAGATAAGTGATGGAAGTAACAATCTCGCCGGACCTAATCCCGATCCAGTTCCATCCCCACCACAACTACTTCAACCGAATTCACAACAGTCCAAGAAGAAACACACCACTGTCATCGTCGTTGCCGCAGCTACAGTTTCATGCCTCGTGCTAATTATTGTTGGTGGCCTCGTACTTTTCCGACTAAAGGGAAGAACGGTTCTTGGAAGGGAAGGAAGGCAAAGAAAGAAAGCGGCATCAGAAGGATCTTCTTCACTACCATCACACCTGTGCCGCTACTTTTCAATAGCGGAGATCAGAGCAGCCACGAACAACTTCGACGAAGTGTTCATCATCGGGGTTGGAGGGTTTGGAAATGTGTACAAGGGCTACATCGACGGTGGTGCAACTGCAACTCCGGTTGCCATTAAACGCCTCAAGAAAGGCTCAGAGCAAGGTGAAAAGGAGTTCCTGAACGAGATCGAGATGCTTTCCCAGCTTCGCCACCTTCATTTGGTGTCCCTCATCGGTTACTGCAACGACGGTGCAGAGATGATCCTTGTGTATGAGTTCGTGCAGCGTGGAACACTCCGTGACAACGTGTACGGTTCAGATAAAGAGCCTCTCACATGGAAACAGAGGCTGGAGATTCTATTGGGTGCAGCAAGAGGGGTGCATTATCTTCATGCAGGTGCGAAGCACAATATCATCCACCGTGACGTCAAGAGCACCAACATCTTGCTAGATGAGAAATGGGTAGCGAAGGTCTCAGACTTTGGGTTGTCTAAAGTGGGACCCACAGGGATGTCCACGACCCACGTCAGCACCATTGTGAAGGGTAGCCTTGGGTATTTAGATCCTGAGTATTACAAGCGTCAACGCTTGACTTTAAAATCTGACGTGTACTCGTTCGGTGTGGTCCTTCTTGAGGTATTGTGTGCGAGGCCACCTTTGGTTCGTAGCGTGGACAAGCACGAGGCAAGCTTGGTTGATTGGTTTCGGAGATGTCATGATGAAGGAAATCTTGATCGGACGGTTGATCCGTTTCTGAAGGACTCTATCAAGCCGGAGTGTTTGAAATGGTACGCACAAACGGCGTTGAGTTGTTTGCATGATGATGGAAATCAACGGCCCTCGATGAGTGATGTGGTTGGTGCTCTTGAGTTTGCACTGCAGTTGGTGGACGCTGAGGACAGTAACAGTAGTTTTGGTGGGTCCCACAAGGGTGAAAAAAGGAAACCGTTATTCTCTTCTAGCGATGAATCTGGGTCCAACAGTAAGGTGACTACAATTTCAGCCAGCAGTGAGGAACAATCAATGGATTCAGCTTTTGTGTTCTCTGAAATTG 2608 0.4712 MFQYMRKIKFLSLLPSLLLFLLQQLFFFTSPVNSYVPIDYFAVNCGYSGNITIHDRNWIGDVDPNLFSTIESSSSQPSLITAHTIPTYSSVDSVPFGTARIFHSQFTYSFPLKTPGPKFLRLHFYPTTYLNFTPYDSLFSVTAGTFTLLKDFNASHWVLQGGDDDTVSKEYCINVEAGDNERLTLNITFIPSTHAYAFINGIEVVSMPSFLYYTDLSNDTGFELVGQGTVSYQLQSDKALETLYRVNVGGSQVPTAKDTGMFRYWDDDFTRYLEQQHPHSIQSGFAVHLNYRNNTVPNYTAPEVVYLTARSYGMNETANYNVTWNFQVDSQFYYMVRLHFCEWDKNIQHSGDRVFEIFIADTMAEELADVILWSGGDLIPTHKDYAVFMISKGNLSKKVNLSVKLQRRRLLQGTRISDVILNGIEIFKISDGSNNLAGPNPDPVPSPPQLLQPNSQQSKKKHTTVIVVAAATVSCLVLIIVGGLVLFRLKGRTVLGREGRQRKKAASEGSSSLPSHLCRYFSIAEIRAATNNFDEVFIIGVGGFGNVYKGYIDGGATATPVAIKRLKKGSEQGEKEFLNEIEMLSQLRHLHLVSLIGYCNDGAEMILVYEFVQRGTLRDNVYGSDKEPLTWKQRLEILLGAARGVHYLHAGAKHNIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPTGMSTTHVSTIVKGSLGYLDPEYYKRQRLTLKSDVYSFGVVLLEVLCARPPLVRSVDKHEASLVDWFRRCHDEGNLDRTVDPFLKDSIKPECLKWYAQTALSCLHDDGNQRPSMSDVVGALEFALQLVDAEDSNSSFGGSHKGEKRKPLFSSSDESGSNSKVTTISASSEEQSMDSAFVFSEI 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91459g00001 869 Gene3D - 238 430 - -
Stsc91459g00001 869 Gene3D - 40 208 - -
Stsc91459g00001 869 PANTHER OS03G0124300 PROTEIN-RELATED 16 488 IPR046957 GO:0004672
Stsc91459g00001 869 MobiDBLite consensus disorder prediction 838 869 - -
Stsc91459g00001 869 FunFam FERONIA receptor-like kinase 40 208 - -
Stsc91459g00001 869 CDD STKc_IRAK 539 808 - -
Stsc91459g00001 869 Pfam Protein tyrosine and serine/threonine kinase 539 806 IPR001245 GO:0004672|GO:0006468
Stsc91459g00001 869 SMART serkin_6 533 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91459g00001 869 ProSiteProfiles Protein kinase domain profile. 533 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91459g00001 869 FunFam receptor-like protein kinase FERONIA 497 611 - -
Stsc91459g00001 869 FunFam Receptor-like protein kinase FERONIA 612 828 - -
Stsc91459g00001 869 ProSitePatterns Protein kinases ATP-binding region signature. 539 564 IPR017441 GO:0005524
Stsc91459g00001 869 MobiDBLite consensus disorder prediction 437 456 - -
Stsc91459g00001 869 SUPERFAMILY Protein kinase-like (PK-like) 509 810 IPR011009 -
Stsc91459g00001 869 Pfam Malectin-like domain 43 429 IPR024788 -
Stsc91459g00001 869 ProSitePatterns Serine/Threonine protein kinases active-site signature. 656 668 IPR008271 GO:0004672|GO:0006468
Stsc91459g00001 869 MobiDBLite consensus disorder prediction 820 869 - -
Stsc91459g00001 869 Gene3D Transferase(Phosphotransferase) domain 1 612 824 - -
Stsc91459g00001 869 Gene3D Phosphorylase Kinase; domain 1 495 611 - -
Stsc91459g00001 869 FunFam FERONIA receptor-like kinase 238 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91459g00001 Stsc-Chr91459 2734 5341 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91459g00001 35 820 Receptor kinase-like Gene Family AT3G51550 46.256 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc91459g00001 Malectin_like 2.9e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91459g00001 - - mtr:25497555 876.7