Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91458g00004 TTGAAAAGGTGTGGGAAAAGTTGTAGACTTAGATGGATGAATTATCTTAGACCAGATATCAAGAGAGGCAATATTTCTGAAGATGAAGAAGACCTCATCATTAGGCTTCACAAACTCCTTGGAAATAGGTGGTCTCTTATAGCAGGGAGGCTCCCGGGGAGAACAGATAATGAGATAAAAAACTATTGGAATAGCATATTGAGTAAAAAGGTAAAAAAGGATGATCACAACATAAAAAGAAGCACCATTATTTCATCATCAGAACCATCCTCGCCAGTAGTTGCTGCTCCTAATAATAAGACTACTGTTGATTACTCTCATGTAATCGGTACAAAGGCTACAAAGATCTCTAAGCCATTATTATTCATAAATAATAATCCACCATTATTCACTCCCCCATCCTCGGAGGCCAATGATGCAAATGCAAAAGAAGAATATGATTCAAAAAGTAACAACATCATGCAACCTATTACCACCACCAGTAGTGGGTTCTTCCTCAATGAAGATGATGATGACAAACCATTCTCACCATCTTTTTTTTTAGACTATGATCTTGAGAATGTTTGCTTGAATGATCTTCTCAACTCAGATTGA 594 0.3687 LKRCGKSCRLRWMNYLRPDIKRGNISEDEEDLIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSILSKKVKKDDHNIKRSTIISSSEPSSPVVAAPNNKTTVDYSHVIGTKATKISKPLLFINNNPPLFTPPSSEANDANAKEEYDSKSNNIMQPITTTSSGFFLNEDDDDKPFSPSFFLDYDLENVCLNDLLNSD 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91458g00004 197 CDD SANT 26 67 IPR001005 -
Stsc91458g00004 197 Pfam Myb-like DNA-binding domain 22 67 IPR001005 -
Stsc91458g00004 197 SMART sant 21 69 IPR001005 -
Stsc91458g00004 197 Gene3D - 1 21 - -
Stsc91458g00004 197 Gene3D - 25 88 - -
Stsc91458g00004 197 FunFam Transcription factor TT2 25 92 - -
Stsc91458g00004 197 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 71 IPR017930 -
Stsc91458g00004 197 ProSiteProfiles Myb-like domain profile. 17 67 IPR001005 -
Stsc91458g00004 197 SUPERFAMILY Homeodomain-like 3 76 IPR009057 -
Stsc91458g00004 197 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 105 - -
Stsc91458g00004 197 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 16 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91458g00004 Stsc-Chr91458 12729 14733 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91458g00004 1 122 MYB Transcription Factor Family AT5G35550 61.475 5.12e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc91458g00004 Myb_DNA-binding 4.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91458g00004 K09422 - gmx:100802704 183.726