Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91458g00002 ATGGCTGCTTCTCCCTCCTCTCTCCTTCTTCCACTAGGTTCTACTTGTGGTAAAAGTCTGTGTTGCAGTCCTCAAGGCATTTCTTCTAACAAGCTTCGATGCTTGGTTCTGCAATACCGAAGATCGATTGTAAAAGCCAAGTACTCGGATACAACAGAATTCGCTGCTATAGTTAATGCTAATTCACGCAGAGACTTTCTAGGATTGGCTTTGGGAGTCTCAGGGCTTTTTGTTGGTTCATTGAAAGCCAAAGGAGCTGGTTTGCCCCCGGAAGACAAGCCGAAACTATGTGATGAAGCTTGTGAGAAAGAGCTTGAAAATGTACCTATGGTAACTACTGAATCAGGTTTGCAATACAAGGATATTAAAGTTGGACAAGGTCCTAGCCCCCCGGTTGGATTTCAGGTAGCAGCTAATTATGTAGCAATGGTTCCTTCTGGACAAGTATTCGATAGTTCATTGGAGAAAGGCCAGATTTACATTTTCCGCGTCGGTTCGGGTCAGGTGATAAAGGGACTTGATGAAGGTCTTCTGAGCATGAAAGTCGGAGGGAAGCGTCGACTGTACATACCTGGACCATTAGCATTCCCAAAAGGCCTTACATCAGCTCCAGGAAGACCAAGGGTGGCTCCAAATAGTCCAGTCATATTTGATGTTAGTTTGGAATATATACCAGGGCTTGAAGTGGATGAGGAATAA 699 0.4464 MAASPSSLLLPLGSTCGKSLCCSPQGISSNKLRCLVLQYRRSIVKAKYSDTTEFAAIVNANSRRDFLGLALGVSGLFVGSLKAKGAGLPPEDKPKLCDEACEKELENVPMVTTESGLQYKDIKVGQGPSPPVGFQVAANYVAMVPSGQVFDSSLEKGQIYIFRVGSGQVIKGLDEGLLSMKVGGKRRLYIPGPLAFPKGLTSAPGRPRVAPNSPVIFDVSLEYIPGLEVDEE 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91458g00002 232 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 133 221 IPR001179 GO:0003755
Stsc91458g00002 232 Gene3D - 92 222 IPR046357 GO:0003755
Stsc91458g00002 232 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 84 225 - -
Stsc91458g00002 232 SUPERFAMILY FKBP-like 99 221 - -
Stsc91458g00002 232 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 133 225 IPR001179 GO:0003755
Stsc91458g00002 232 FunFam Peptidylprolyl isomerase 105 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91458g00002 Stsc-Chr91458 3720 6539 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91458g00002 114 221 Calmodulin-binding Proteins AT3G25230 36.697 7.33e-13 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91458g00002 K01802 - gmx:100784939 355.14