Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91450g00004 ATGGACAATCTATTACTTCTTTTATTTTTCTTTGTGTGGCTAAGCATTCAAACTCTCATCTCCAAATTAGTAACAAAATCATCAAAATCCTTCAAACTTCCACCGGGCCCTAACCCTCTTCCAATCCTAGGAAACATCTTAGAACTTGGTAACCAACCTCACAAATCACTAACTAAGCTTTCTCAAATCTATGGACCCATAATGACTCTTAAGCTTGGCAAATTAACCACCATAGTTATTTCATCTCCACAATTAGCCAAAGAAGTTCTCCACAAAAATGACCAAAATTTCTGCTATAGAACTGTTCCGGATACTGTCAAAGCTCATGACCATCACATATATTCGGTCGGATGGATGCAACCGTTGTCTCAATGGAGAACACTTAGAAAAATTTGTGCTACCAAAGTATTCTCTTCGCAACAACTTGATTCTACACAGGTTGTTCGTCGAAGAAAAGTCAAAGAATTAATGGATTTCGTGAAAAAAACGAGTGAGACATACGATGTTTTGGATATTAGCGAAGCTATTTTCACAACCGTGCTAAATTCGATATCAAACACTTTGTTTTCTAAGGATGTGGTCCAACTTGGTTGTTCTTCTAAGTCTCAAGAATTCAAGGGCATCTTTTGTGGGATCACTGAAGAAGCTGGGAAGCCTAATGTTGTGGATTACTTCCCAATCTTTCGCAAGATTGATCCACAAGGTGCACGTGCTAGAATGACCAAATATTACAAGAAGATGATTGATTTTTTGGATGGTATTGTGGAAGAAAGATTGAGACTAACAAAGGGTCTAGAAATGGTGGACACCAAGGAATACAAAGATGTGTTAGATTATGTGTTAGAAGTCATGTTGGAGGATAATTCTCAAGTCACTCGTATCCATGTCTTGCATTTACTTGTGGATTTATTTGTGGCTGGAATAGACACAACAGCAAGCACTATAGAATGGGCAATGGCAGAGTTACTATACAACTCAAAAGAACTACAAAAATTGAAAAATGAACTTCAAGAAGTTCTTGGCAAAGAAGAAAAACAAATTGAAGAATCACACATCTCAAAGCTTCCTTTCCTAAGAGCAGTGGTGAAAGAAACGTTTCGGTTACATCCACCATTTCCACTAATACCACACAAGTCTAAAGAGGATGTTGAATTATGTGGATTCAATGTGCCTAAAAATGCACAAGTCTTGATTAACATATGGGGTGTAGGGAGAGATCCAAGTATTTGGAGAAACCCTAATGAGTTTATTCCTGAAAGATTCTTGGAAAGTAAGATTGATTATCAAGGAAATGATTGTGAGTTAATTCCATTTAGTGCTGGAAGAAGAATGTGTCCTGGGTTGCCATTGGCTTATAGAGGTGTGCACACTGTGTTGGGTTCTCTTCTACATTGCTATGATTGGAAGCTTGTGAATAATGGAGAAAAGGAAAAAGGTTTGGATATGTTTGATGAGAAATTTGGACTTAGCTTGCATAAGGCTAAGCCTCTTCAAGCTATTCCCATATACAGTCACAACAATTAA 1524 0.3747 MDNLLLLLFFFVWLSIQTLISKLVTKSSKSFKLPPGPNPLPILGNILELGNQPHKSLTKLSQIYGPIMTLKLGKLTTIVISSPQLAKEVLHKNDQNFCYRTVPDTVKAHDHHIYSVGWMQPLSQWRTLRKICATKVFSSQQLDSTQVVRRRKVKELMDFVKKTSETYDVLDISEAIFTTVLNSISNTLFSKDVVQLGCSSKSQEFKGIFCGITEEAGKPNVVDYFPIFRKIDPQGARARMTKYYKKMIDFLDGIVEERLRLTKGLEMVDTKEYKDVLDYVLEVMLEDNSQVTRIHVLHLLVDLFVAGIDTTASTIEWAMAELLYNSKELQKLKNELQEVLGKEEKQIEESHISKLPFLRAVVKETFRLHPPFPLIPHKSKEDVELCGFNVPKNAQVLINIWGVGRDPSIWRNPNEFIPERFLESKIDYQGNDCELIPFSAGRRMCPGLPLAYRGVHTVLGSLLHCYDWKLVNNGEKEKGLDMFDEKFGLSLHKAKPLQAIPIYSHNN 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91450g00004 507 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 502 - -
Stsc91450g00004 507 SUPERFAMILY Cytochrome P450 34 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00004 507 CDD CYP76-like 61 501 - -
Stsc91450g00004 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Stsc91450g00004 507 Gene3D Cytochrome P450 18 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00004 507 Pfam Cytochrome P450 34 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00004 507 FunFam Cytochrome P450 76C4 25 500 - -
Stsc91450g00004 507 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00004 507 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00004 507 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00004 507 PRINTS E-class P450 group I signature 359 377 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00004 507 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00004 507 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00004 507 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00004 507 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00004 507 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00004 507 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00004 507 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00004 507 Coils Coil 319 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91450g00004 Stsc-Chr91450 17528 19588 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91450g00004 7 502 Cytochrome P450 AT2G45550 45.328 2.38e-149 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91450g00004 - - gmx:100809483 629.017