Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91450g00003 ATGGACTATCTATTTCTTCTTCTTTTATCTTCCTTTGTGTGGATTAGCATTCAAATTCTCATTTCAAAATTAGCCATCAAAATACCAAAATCGTCGCTCAAACTTCCACCAGGGCCTAACCCTTTTCCAATCATAGGAAACATCTTAGAATTTGGCAACCAACCTCATCAAGCACTTGCTAAGCTTTCCAAAACCTATGGACCAATAATGACTATGAAGCTTGGTAACATAACCACCATAGTTATTTCATCTCCACAATTAGCCAAAGAAGTTCTCCATAAAAATGACCTAATTTCTACTTGTAGAGCGGTTCCAGATACTCTTAAAGCACTCGACCACCACATATATTCCGTGGGATGGATGCAACCTTTGCCTATGTGGAGGACGCTCAGGAAAGTTTGCGCTACGAAAGTGTTTTCATCCCAACAACTCAATTCTACGCAAGTTGTTCGTCAAAGAAAACTGAAAGAATTGTCGAATTTTCTAAAGGAAGGAAGTGAAAAAAGCGAAATCTTGAATATTAGCGAAGTTATTTTTGTAATCATACTTAATTTCATTTCAAACACTTTGTTTTCCATGGATTTGGTTAGTTTTGGTGGTTCTAATAAGTCTCAAGAATTCAAGGACATAATTAGTGGTATAAGTGAAGAAGCTGGAAAACCTAATGTTGTGGATTTCTTTCCATTCATAAGGAGAATTGATCCACAAGGTGCACGTGCTAGAATGACCAAATATTTTAGGAAGATAATGGATATATTTGATGGAATTGTAGAAGAAAGATTGCGTTTAAGAGCTCAAGAAATGGACACCAAGGAATACAAAGATGTGTTAGATTATTTGCTAGAAGTGATGTTGGAGGATGATTCTCAAATAAGCCGAATCCATGTGTTGCATCTACTTATGGATCTATTTGTGGCTGGACTAGAGACAACATCAGTTACCATAGAATGGGCAATGGCAGAGTTACTAAGAAACCCAGAAAAATTGCAAAAAATGAAAGAAGAGCTTGAACATGTTCTTGGCAAGGATAATGATGAAGAACAAATTGAAGAATCACATATCTCAAATCTTCCTTTCCTAAGAGCAGTGGTGAAGGAAACTTTTCGGCTTCACACACCACTCCCACTCTTAGTGCCACACATGTCACAAGAAGATGTTGAATTATGTGGCTTCATTGTGCCTAAAAATGCACAAGTTTTGGTTAATGTGTGGGCCATGGGGAGAGATTCAAGTATTTGGACAAACCCTAATGAATTCATGCCTGAAAGATTCTTGGGGAACAAGATTGATTTTAAAGGTCAAGATTTTGAGTTGATTCCTTTTGGTGCTGGAAGAAGAATTTGTCCTGGATTACCATTGGCTTATAGGACTATGCATATTGTGTTGGGAACTCTTGTTCATGGCTATGATTGGAAGTTAGTGAATGGGCAAAAGGCAAAGGATCTTGATATGGCTTCCATTTTTGGGCTTACCTTGCATAAAGCCCAACCTCTCCAAGCTATTCCAATAAAAACATAA 1518 0.3748 MDYLFLLLLSSFVWISIQILISKLAIKIPKSSLKLPPGPNPFPIIGNILEFGNQPHQALAKLSKTYGPIMTMKLGNITTIVISSPQLAKEVLHKNDLISTCRAVPDTLKALDHHIYSVGWMQPLPMWRTLRKVCATKVFSSQQLNSTQVVRQRKLKELSNFLKEGSEKSEILNISEVIFVIILNFISNTLFSMDLVSFGGSNKSQEFKDIISGISEEAGKPNVVDFFPFIRRIDPQGARARMTKYFRKIMDIFDGIVEERLRLRAQEMDTKEYKDVLDYLLEVMLEDDSQISRIHVLHLLMDLFVAGLETTSVTIEWAMAELLRNPEKLQKMKEELEHVLGKDNDEEQIEESHISNLPFLRAVVKETFRLHTPLPLLVPHMSQEDVELCGFIVPKNAQVLVNVWAMGRDSSIWTNPNEFMPERFLGNKIDFKGQDFELIPFGAGRRICPGLPLAYRTMHIVLGTLVHGYDWKLVNGQKAKDLDMASIFGLTLHKAQPLQAIPIKT 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91450g00003 505 Gene3D Cytochrome P450 23 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00003 505 CDD CYP76-like 63 502 - -
Stsc91450g00003 505 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 8 504 - -
Stsc91450g00003 505 FunFam Cytochrome P450 76C4 28 501 - -
Stsc91450g00003 505 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00003 505 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00003 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00003 505 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00003 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Stsc91450g00003 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00003 505 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00003 505 PRINTS E-class P450 group I signature 402 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00003 505 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00003 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00003 505 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00003 505 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00003 505 Pfam Cytochrome P450 36 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00003 505 SUPERFAMILY Cytochrome P450 31 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91450g00003 Stsc-Chr91450 13530 15618 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91450g00003 4 504 Cytochrome P450 AT2G45550 46.443 6.71e-163 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91450g00003 - - gmx:100779789 689.878