Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91450g00002 ATGAACATAGTATCAAACACTTTTATTTCTAAGGATTTTGTTGGTTACCATGATAATGATGAGAAGTTTAAAGTGTTTAAGGATGTAATTTTTGGATTGACTGAAGAATCTTCAAGGCTTTCTTTGGGAGATTTTTTTCCTTTGTTAGGATCTTTTGGTTCACGTGGTGCACGTGCAAGGACAAAAGATCGATTTGCAAAGCTGTATGCAGTTTTTGATGGTGCCATTGAAGAGAAGATTCGATCGAGGGATTCAAAAACTGATTCTAGTGATTGCAATGATGTATTGGATTCCCTTTTGGATCTTGTCAATGAAGAGAAGTCTGAATTGAATCGCCATGATGTTTTGCATTTACTCATTGATTTATTTATTGCTGCAATAGACACAACATCAAGCACATTAGAATGGGCAATGGCAGAGTTGATGCATAATCCAACAAAATTGCATAAATTTAGAGAAGAGCTTCAACAATCACTTGGCAAAAATGGAGAAGTTGAAGAATCTCATGTCTCAAAACTCCCTTACCTTAATGCAATTGTGAAAGAAGCTTTGAGGCTTCATCCACCAGCACCAATGCTCATACCCCACAAAGGAAATGATGATGTTGAGTTAGGTGGCTTCACTGTGCCCAAAAATGCACAAATTCTAATTAATGCGTGGTTTATTGGAAGAGACCCAGACATTTGGGCTAATCCTAATTCATTTGAACCGGAGAGGTTCTTGGATAGTGAAATTGATTTTAAGGGTAAACATTTTGAGTTGATTCCATTTGGTTCTGGAAGAAGAATTTGCCCCGGATTACCATTGGCTTCAAGGAGTTTGGGTTTTATGTTGGCATCACTTTTGTATCATTTCAATTGGAAGGTTGCTAATGGGATGAATCCAGAAGATATAGATATGAGTTTTAGTTATGGCCTTACCTCGCATAAGGCCCAACCTTTACTTCTTGTACCTACTAAAGTTTAG 966 0.3716 MNIVSNTFISKDFVGYHDNDEKFKVFKDVIFGLTEESSRLSLGDFFPLLGSFGSRGARARTKDRFAKLYAVFDGAIEEKIRSRDSKTDSSDCNDVLDSLLDLVNEEKSELNRHDVLHLLIDLFIAAIDTTSSTLEWAMAELMHNPTKLHKFREELQQSLGKNGEVEESHVSKLPYLNAIVKEALRLHPPAPMLIPHKGNDDVELGGFTVPKNAQILINAWFIGRDPDIWANPNSFEPERFLDSEIDFKGKHFELIPFGSGRRICPGLPLASRSLGFMLASLLYHFNWKVANGMNPEDIDMSFSYGLTSHKAQPLLLVPTKV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91450g00002 321 FunFam Geraniol 8-hydroxylase 65 317 - -
Stsc91450g00002 321 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 320 - -
Stsc91450g00002 321 SUPERFAMILY Cytochrome P450 2 319 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00002 321 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 257 266 IPR017972 GO:0005506|GO:0016705
Stsc91450g00002 321 Gene3D Cytochrome P450 1 316 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00002 321 PRINTS E-class P450 group I signature 114 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00002 321 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00002 321 PRINTS E-class P450 group I signature 218 242 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00002 321 PRINTS E-class P450 group I signature 254 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00002 321 PRINTS E-class P450 group I signature 264 287 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00002 321 PRINTS E-class P450 group I signature 134 160 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00002 321 PRINTS P450 superfamily signature 178 189 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00002 321 PRINTS P450 superfamily signature 125 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00002 321 PRINTS P450 superfamily signature 264 275 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00002 321 PRINTS P450 superfamily signature 255 264 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00002 321 Pfam Cytochrome P450 1 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91450g00002 Stsc-Chr91450 10098 12401 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91450g00002 1 320 Cytochrome P450 AT2G45570 48.297 1.28e-107 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91450g00002 - K20556 gmx:100809483 377.481