Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91450g00001 ATGGATTTGGTTGATTACTATGATAATGAGAAGTTTGAAGTGTTCAAGGATATGGTGACTGGCTTCGTTGAAGACTCTGCAATGCTTCGTTTGGGAGATTTTTTCCCTTTGTTAGGGTTTTTGGATTCACCTGGTGCACGTGCAAGGGCAAAAAATCGCTATGCAAAGTTGTATGCAGTTTTTGATGGAGCCATAGAAGAAAGAATTCGTTTGAGGGATTCAAAACCTGGTTATTCTCAAGAGTTCAATGATGCATTGGATTCCCTTTTGGATTTTGTCAATGAAGAGAGTTCTGAATTCAGTCGCCATGATGTTCTCATGTTATTGATGGATTTATTTGTTGTTTCTATAGAGACCACAGCAAGCACATTAGAATGGGGGATGGCAGAGTTGATGCATAGTCCAACAAAATTGCACAAAGTTAAAGAAGAGCTTCAACAATCACTTGGCAAAAATGGAGAAGTTGAAGAGTCTCATATCTCAAAGCTCCCATACCTTAATGCAATTATGAAAGAAACTTTTAGGCTTCATCCACCAGTACCATTGCTCGTACCCCACAAAGCAAATGAAGACGTAGAGTTAGGTGGCTTCACTGTGCCCAAAAATGCACAAGTCGTAGTTAATGTGTGGTCTATTGGAAGAGACTCACACATTTGGGCTAACCCTAATTCGTTTGAACCCGAGAGGTTTTTGGGTAGTGAAATTGATTTTAAGGGCAGCCATTTTGAGTTGATTACATTTGGTTCTGGAAGAAGAATTTGCCCTGGATTACCATTGGCTTCAAGGACTTTCACTTTTATTTTGGCATCACTTTTGTATCATTTCAATTGGAAGGTTGCTAATGAGATGAACCCAGAAAACATAGACTTGAGTCATAATCGTGGTTTGTCCATGAATAAGGCCCAACCTTTACTTCTTGTACCTATCAAAGTTTAG 936 0.3921 MDLVDYYDNEKFEVFKDMVTGFVEDSAMLRLGDFFPLLGFLDSPGARARAKNRYAKLYAVFDGAIEERIRLRDSKPGYSQEFNDALDSLLDFVNEESSEFSRHDVLMLLMDLFVVSIETTASTLEWGMAELMHSPTKLHKVKEELQQSLGKNGEVEESHISKLPYLNAIMKETFRLHPPVPLLVPHKANEDVELGGFTVPKNAQVVVNVWSIGRDSHIWANPNSFEPERFLGSEIDFKGSHFELITFGSGRRICPGLPLASRTFTFILASLLYHFNWKVANEMNPENIDLSHNRGLSMNKAQPLLLVPIKV 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91450g00001 311 Pfam Cytochrome P450 5 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00001 311 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 247 256 IPR017972 GO:0005506|GO:0016705
Stsc91450g00001 311 FunFam Geraniol 8-hydroxylase 54 307 - -
Stsc91450g00001 311 Gene3D Cytochrome P450 3 306 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00001 311 PRINTS P450 superfamily signature 168 179 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00001 311 PRINTS P450 superfamily signature 245 254 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00001 311 PRINTS P450 superfamily signature 115 132 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00001 311 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 310 - -
Stsc91450g00001 311 PRINTS E-class P450 group I signature 167 185 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00001 311 PRINTS E-class P450 group I signature 254 277 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00001 311 PRINTS E-class P450 group I signature 208 232 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00001 311 PRINTS E-class P450 group I signature 244 254 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00001 311 PRINTS E-class P450 group I signature 104 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00001 311 PRINTS E-class P450 group I signature 124 150 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc91450g00001 311 SUPERFAMILY Cytochrome P450 8 308 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91450g00001 Stsc-Chr91450 2961 4910 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91450g00001 7 310 Cytochrome P450 AT2G45570 47.883 2.84e-98 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91450g00001 - K20556 gmx:100779789 348.206