LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Stsc91449g00003	ATGGCGACGCCATTGTCGTCCTTCTACTCCGGTGTCGTCGTGGTTAGTGATCTCCGCCATCTTCAACAGCTTCTTCAAGAGGTTCTTCTTCTTCAAGAGCTTCTTCTTCGTGAAGAGCTTCTTCTTTGTTCGAAACGTTCTTCATCAATTTTGAAAGAATTGACTAATGTTAGGCAGGAACAACATCATGAAGTTCCTTCTACTGAAGAAGCCCTTCAGCATGAAGATAATGTTAATGGAGAGAAGATAATTGCAAACCAATCTATTCTTTGTAACAAGCATGGAAATCTGACTTCTCGTGTACTTGCTCCCATCAGATCTAAGAAGATTTCATCAGAAAAGTGCAAGGCTAGGGTTTATGTGAAGTTGGACAAAGAAAAAGGGACTTGGTTTTATGCAATATTTGAGGCAAAGCACACACATGCTTGTTCTCCTCAAAAGTCTCTTCATTACCATGAGTACAGGGAATTAAACATGCATGCAAAGTGTGTGATAGAAGATAATGATGAAGTCGGAATAAAACCTAACAAGACATATCTTGCACTTAGCAATGAAGTGGGCGGATCTTCCAACTTAAATTTTTCAGAAAAAGATGTCAGAAATTACATAACTTGTAAACTTCGGACAAGTGATCCAACCTTGAAGTTAGGGAGATGTTACAATATTTCAACCGAATGA	678	0.3879	MATPLSSFYSGVVVVSDLRHLQQLLQEVLLLQELLLREELLLCSKRSSSILKELTNVRQEQHHEVPSTEEALQHEDNVNGEKIIANQSILCNKHGNLTSRVLAPIRSKKISSEKCKARVYVKLDKEKGTWFYAIFEAKHTHACSPQKSLHYHEYRELNMHAKCVIEDNDEVGIKPNKTYLALSNEVGGSSNLNFSEKDVRNYITCKLRTSDPTLKLGRCYNISTE	225

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Stsc91449g00003	225	PANTHER	FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED	83	204	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Stsc91449g00003	Stsc-Chr91449	11241	12719	Dispersed

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	FAR1	Stsc91449g00003		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Stsc91449g00003	-		-	ahf:112763010	172.555