Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91444g00001 ATGTCGGATGCAATGGAAAAAGCAAGGTACTCTCTGCTGAAGGATTTAAGAGCTGAAATTGAAGTGAAGGACGGAACTTTTTCTCTATGCTTTTGGGTGTATTTGACCAACTCAACTACATTTCCTGCTACCATTATTCAGCAGGTTTGCTCTGATGTTTCCCAGAGTGCCCCTTTCCTTGTTATAAACGATCATAAAAGAATCAATCTTCTACCACTTCTTCTCTTACATGAAGAAGCTCCTGATACTGGCAATATCAATTCCTTGACAGAAGTTGCATATGCAACTGTAGATTTTGAGTTTCCATTGGAAAATTGGGTTCACATTGGATGTGAGGTTTGTTCTAATCACATGAAGCTACAGATTAATGGAGAGATTGTTGGAGAAAAACTGCTGTCTCCTTTATCAAATAAGGAATCCAATTCAAATGATTTAAGGAAAATAGTTTTGGCAAATATCGGTGGAGATGGAAATAATTCACAGGGTTATGTGCTCAATTTTGAAATCTTCCCTTCTGTTTCATCTATTAAAGATCACCATTTGAAGGATCCTCCTCTAAAGTTATCAATTGATGAGTCGTCTGCCTCTGAGATTGAAGAAGAAAGTGATGGTGTTTGGAGCATTGTTGGTGGCAAGGCATCTTGTCGTAGGAACTTCTCTTTGGACGTTGTTCTCCTAGATGTTTTTGGACAACCTGTTGATAAGGAGAATGAGGTTTATGCTTCACTTTTGTATGCTGACACACGGACACCAGTGGAGAATACAACTGATGAAGAAGCACCCATTTTGGCTAGCTATGATGGAATTGAATTTCCGTCTTATGAAAGACCAAGTAAACTTTTACTGGGCCGTGCTTCTTTTAAGCTGAAGATATCTCAGCTTTCATCCAAGTGTGATAACAGGTTGTTCCTCATCAAATTCTGTATTCCAAAATTAGGGAATTATCCTTTTTTTGAGGCGCACTCCCGTCCAATTCGATGCATATCCAGGAGTCGTAATACACGATTGTCTACCCTGGTGTGGAAAAGGTCATCTGGTCTTCCTACGCATAATTTAATGCAATCTTCAGCAATGGATGATGCATCCTTTGAAAATCAACATCCTATTCGTGAAGCAAAATCTAGTCCATTAGTGAAGCGATTCAGATTTGGACATGACAAGATATCTGTATCAGTGAAGGCTGACACCAGCCTAGAGCAACCAGACGAGGAATCTAATTCTCATGCCTGGACAACTAATCAGGTTGAGAATTGTACACCTGCTAACGATGAGGCATATGACTCTCTGTCTGATTCAGAGAGTATAGGGGAGAGAAATTCGCCTTCAAATAATGTGGCAAGAAGATATCCAATATCTGACATGACTGTTTTTAAGTACTGCTTGGCAAGCTTGACTGAGAGATCACTGATGCTTAAGGAGATTGCTTCCTTGGCTTCAAAGACAGAAATTTTACAGTTGGCACATCATGTGTCACTTTATTCAGGATGTTCACACCATGGAAATCAAATAGTGATTGCCAAAAGATTGGTAGAAGATGGAACTAATCTTTGGAAGGTGATGTCTCCAAACAACAACCACATTCCTTGGGAGAGTGCAGTTTATGAGATTGAAGAGCAATTCATGAAGATTGCTTCTTGCAGTTCGCGATCTCTCTCACATCAGGACCTAGAGCTTCTAAGAGTTATTGCTGGATGTCATGAGTACCTAGCCCAAGAAAACTTTGAGAAGTTATGGTGCTGGTTGTACCCTGTAGCTTACATAATATCAAAGGAGTGGATAAACCCTATCTGGAATTCCACATCACCTAAGTGGATAGAAGGATTCATAACTAAGGAGGAAGCAGAAGCTTCGCTTCAAGGTCCCACAGAACTTCAAGAACCAGGTACATTTATATTGAGATTCCCCACCTCAAGAAGCTGGCCCCACCCAGATGCAGGTAGCCTAATTGTCACATATGTTGGCAATGATTACAGAGTTCACCACAGGCTACTTTCGTTGGATCATGTTTATGGCTCTGGTGATAAAGGAATAGACATGAAGCCACTCCAAGACATGCTACTGGCAGATCCTGAGCTGACTCGATTGGGAAGGATAATACGAAGCCATTAG 2109 0.4068 MSDAMEKARYSLLKDLRAEIEVKDGTFSLCFWVYLTNSTTFPATIIQQVCSDVSQSAPFLVINDHKRINLLPLLLLHEEAPDTGNINSLTEVAYATVDFEFPLENWVHIGCEVCSNHMKLQINGEIVGEKLLSPLSNKESNSNDLRKIVLANIGGDGNNSQGYVLNFEIFPSVSSIKDHHLKDPPLKLSIDESSASEIEEESDGVWSIVGGKASCRRNFSLDVVLLDVFGQPVDKENEVYASLLYADTRTPVENTTDEEAPILASYDGIEFPSYERPSKLLLGRASFKLKISQLSSKCDNRLFLIKFCIPKLGNYPFFEAHSRPIRCISRSRNTRLSTLVWKRSSGLPTHNLMQSSAMDDASFENQHPIREAKSSPLVKRFRFGHDKISVSVKADTSLEQPDEESNSHAWTTNQVENCTPANDEAYDSLSDSESIGERNSPSNNVARRYPISDMTVFKYCLASLTERSLMLKEIASLASKTEILQLAHHVSLYSGCSHHGNQIVIAKRLVEDGTNLWKVMSPNNNHIPWESAVYEIEEQFMKIASCSSRSLSHQDLELLRVIAGCHEYLAQENFEKLWCWLYPVAYIISKEWINPIWNSTSPKWIEGFITKEEAEASLQGPTELQEPGTFILRFPTSRSWPHPDAGSLIVTYVGNDYRVHHRLLSLDHVYGSGDKGIDMKPLQDMLLADPELTRLGRIIRSH 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91444g00001 702 Gene3D SH2 domain 590 700 IPR036860 -
Stsc91444g00001 702 FunFam SH2 domain protein B 590 702 - -
Stsc91444g00001 702 ProSiteProfiles Src homology 2 (SH2) domain profile. 604 702 IPR000980 -
Stsc91444g00001 702 MobiDBLite consensus disorder prediction 403 445 - -
Stsc91444g00001 702 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 173 IPR013320 -
Stsc91444g00001 702 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 25 691 IPR001217 GO:0003700|GO:0006355|GO:0007165
Stsc91444g00001 702 Gene3D - 6 176 - -
Stsc91444g00001 702 MobiDBLite consensus disorder prediction 394 445 - -
Stsc91444g00001 702 CDD SH2_SHA 593 702 - -
Stsc91444g00001 702 SUPERFAMILY SH2 domain 598 666 IPR036860 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91444g00001 Stsc-Chr91444 12305 25219 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Stsc91444g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91444g00001 - - gmx:100803169 1105.51