Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91434g00005 ATGGATCGACCTGGTGGTGGTGCGGTGAATGTTGGTGTTGGAATGGATATGGTGATCATGCATGAGAGTGAAAGATATGAACTTGTTCGCAATATTGGCTCTGGCAATTTTGGGGTGGCAAGGCTTATGAGAGACAAGCACACTAATGACCTTGTTGCTGTCAAATATATTGAGAGAGGTGATAAGATAGATGAAAATGTAAGAAGGGAAATTATAAACCACAGATCACTAAGGCATCCAAATATTGTTAGGTTCAAAGAGGTCATCTTGACCCCAACGCATTTGGCGATTGTGATGGAATATGCTGCTGGTGGAGAGCTATTTGAGCGAATATGCAATGCAGGACGGTTCAATGAGGATGAGGCACGCTTCTTCTTTCAACAACTTATCTCAGGGGTTAGCTACTGTCATGCAATGCAAGTATGCCATCGTGACTTGAAGTTAGAGAACACATTACTAGATGGTAGTCCAGCTCCTCGATTAAAGATATGTGATTTTGGGTATTCTAAGTCCTCAGTGCTACATTCACAACCAAAATCTACAGTTGGTACCCCTGCATACATTGCTCCAGAAGTTCTACTCATGAAGGAATATGATGGCAAGATTGCAGATGTGTGGTCTTGTGGGGTGACCTTATATGTCATGTTGGTGGGCTCGTATCCTTTTGAGGATCCAGATGAACCAAAAAATTTCCAGAAGACAATTCATAGGATTTTGAAAGTCCAGTACTCAATTCCTGACAGTGTTAACATATCACCCGAATGCCGTCATCTGATCTCAAGAATCTTTGTTGCTGATCCTGCACAGAGAATAAACATGCCTGAGATTAGAAACCATCCGTGGTTTCTGAAGAACCTCCCAGCTGATCTCATAGTTGACTATACAAACAACCAGTTCCAGGAGCCTGAGCAACCGGTGCAGAGCATTGAAGAAATCATGCAGTTAATTGCAGAGGCTACAATTCCCGCAGCCGGAACTCAGTCTTTGAACCAGTATCTTAACGGGAGCTTGGATATTGACGACATGGACGAGGACATAGAGATTGATGATCCCGAACTTGACATTGATAGCAGTGGAGAAATAGTTTATGCAATGTAA 1098 0.4271 MDRPGGGAVNVGVGMDMVIMHESERYELVRNIGSGNFGVARLMRDKHTNDLVAVKYIERGDKIDENVRREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYAAGGELFERICNAGRFNEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLMKEYDGKIADVWSCGVTLYVMLVGSYPFEDPDEPKNFQKTIHRILKVQYSIPDSVNISPECRHLISRIFVADPAQRINMPEIRNHPWFLKNLPADLIVDYTNNQFQEPEQPVQSIEEIMQLIAEATIPAAGTQSLNQYLNGSLDIDDMDEDIEIDDPELDIDSSGEIVYAM 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91434g00005 365 ProSiteProfiles Protein kinase domain profile. 26 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91434g00005 365 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Stsc91434g00005 365 SMART serkin_6 26 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91434g00005 365 Gene3D Transferase(Phosphotransferase) domain 1 102 290 - -
Stsc91434g00005 365 CDD STKc_SnRK2 25 281 - -
Stsc91434g00005 365 ProSitePatterns Protein kinases ATP-binding region signature. 32 55 IPR017441 GO:0005524
Stsc91434g00005 365 SUPERFAMILY Protein kinase-like (PK-like) 19 310 IPR011009 -
Stsc91434g00005 365 Gene3D Phosphorylase Kinase; domain 1 8 101 - -
Stsc91434g00005 365 FunFam Serine/threonine-protein kinase SRK2E 102 290 - -
Stsc91434g00005 365 FunFam Serine/threonine-protein kinase SRK2E 17 101 - -
Stsc91434g00005 365 Pfam Protein kinase domain 26 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91434g00005 365 PANTHER SERINE/THREONINE KINASE 24 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91434g00005 Stsc-Chr91434 13737 17130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91434g00005 25 311 CBL-interacting serine-threonine protein kinases AT5G25110 41.806 7.31e-69 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Stsc91434g00005 Pkinase 1.3e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91434g00005 K14498 - gmx:100804702 637.876