Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91434g00001 ATGGATGATGATGATGATGATAATGGTGCATTGATGAAAGCTGCTTCATTAGCATGTTGTCAAGTGTTTAGTGCAATCTTGAACGCTGCTGTTGAAATGAACTTGTTTGATATCATATCATCATCATCATCATCAGGAGGAATGAGTGCCTCTGAAATTGCCTCTAAGCTTCCAAACCAACACAAGGAGATGGGTAGCAGGCTTGAACGCATGCTTCCATCATTGGTGGCTCATTCTCTTCTCACTTGCTCCATTCATAACCAACACAGGCTTTATGCTCTCTCCCCTGTTGGACAATACTTTCGACGTCATCAACAAGGCACCTCTTTGGCTTCAATCTCAACTTTTCTCTATCAGGCCTTCCCTCATACTTGGTAA 378 0.4259 MDDDDDDNGALMKAASLACCQVFSAILNAAVEMNLFDIISSSSSSGGMSASEIASKLPNQHKEMGSRLERMLPSLVAHSLLTCSIHNQHRLYALSPVGQYFRRHQQGTSLASISTFLYQAFPHTW 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91434g00001 125 SUPERFAMILY "Winged helix" DNA-binding domain 6 104 IPR036390 -
Stsc91434g00001 125 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 15 125 IPR016461 GO:0008168
Stsc91434g00001 125 Gene3D - 1 101 IPR036388 -
Stsc91434g00001 125 PANTHER O-METHYLTRANSFERASE 20 115 IPR016461 GO:0008168
Stsc91434g00001 125 FunFam Caffeic acid 3-O-methyltransferase 1 101 - -
Stsc91434g00001 125 Pfam Dimerisation domain 26 75 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91434g00001 Stsc-Chr91434 632 1009 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91434g00001 6 113 Monolignol Biosynthesis Gene Families AT5G54160 37.168 4.85e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91434g00001 K13066 - adu:107471788 137.887