Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91427g00004 ATGGTGAATCACCATCATTATTCTTCAAAAGAAAGAAGGGAAATAATGGAGCAAGAGCTACTTAGAGGGCGTGATGTGGCAAATCAATTGCTTCAAGTTCTTGTTCATAGATCCAATAACAAGAACAATGATGATGAACAAGGGTTGATGTTGATCTTACCATTTGCTGAAGATCTTGTGCACCAAGTGCTAAGATCATTCACAAACACCCTTTTGCTCTTGAACAGCTCCAACAATAATAATAATCATAATAATAGTAATATCGATGGTGCAATTTTTCCTATCACTATGAGAGATTTATCTTCTTCTTCTTCCTCCCCTTCAAGAAGCCAAAAGCATGAGGATTTGGATGAGGCTTGCAAAAGTTTCCACACTAAAAACCGAAGAGGGCGCTACAAGAGAAAATCAACTGAACCAACTTGGGAGAGGGACAATCCAATTCTATTTGAAGATGGCCATGCATGGAGGAAGTACGGACAAAAGAAGACAATAAATTCAAAATTCCTCAGGAGCTACTACAGGTGCAGTCATAAGTATGACGAGGGTTGCCCAGCAATGAAACATGTTCAAAGAATTCGAGAGAATCCTCCATTATACCGAACAACCTATTATGGTCATCACACTTGCAAGAACACTCTTTATAATAATGAGGAATCAATTATTATTTTGGAACATGAATCTAAGTCTTCAATGTTCCTTAGCTTCAATAATAATAATAACAACAATAAGAGTATCATCCCTGCTGCTAGAAGCAAAGAACAACAATTTTCAACACCAACTTTCAGATCAACAAAACAAGAGCCAGTGGAAACAGTGATTCAAGATGATCATCAGAGTCAATTACTATATGATGATCACCATGAGGTTGATTTTGCTAAGTTATCATCATCACCATCACCATCACCATCTTGCATTGATGATAATACTACTACTGTTCATAAGTTTGATGACAATAGTTATTATGATTGTGGATGGGACTTGGATTATTTTGATGGCTTGCCATGTTTTGGTGATCAAGATCAGTTTTTGATTATGCAAGAGGTTTAA 1047 0.3658 MVNHHHYSSKERREIMEQELLRGRDVANQLLQVLVHRSNNKNNDDEQGLMLILPFAEDLVHQVLRSFTNTLLLLNSSNNNNNHNNSNIDGAIFPITMRDLSSSSSSPSRSQKHEDLDEACKSFHTKNRRGRYKRKSTEPTWERDNPILFEDGHAWRKYGQKKTINSKFLRSYYRCSHKYDEGCPAMKHVQRIRENPPLYRTTYYGHHTCKNTLYNNEESIIILEHESKSSMFLSFNNNNNNNKSIIPAARSKEQQFSTPTFRSTKQEPVETVIQDDHQSQLLYDDHHEVDFAKLSSSPSPSPSCIDDNTTTVHKFDDNSYYDCGWDLDYFDGLPCFGDQDQFLIMQEV 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91427g00004 348 Pfam WRKY DNA -binding domain 150 210 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc91427g00004 348 Gene3D WRKY domain 139 211 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc91427g00004 348 SMART WRKY_cls 149 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc91427g00004 348 SUPERFAMILY WRKY DNA-binding domain 145 210 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc91427g00004 348 MobiDBLite consensus disorder prediction 99 122 - -
Stsc91427g00004 348 ProSiteProfiles WRKY domain profile. 144 207 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc91427g00004 348 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 17 236 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91427g00004 Stsc-Chr91427 15457 18114 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91427g00004 11 209 WRKY Transcription Factor Family AT3G56400 34.826 1.22e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc91427g00004 WRKY 1.2e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91427g00004 - - aip:107610898 431.409