Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91427g00003 ATGGAGAATCAAAGAAAAGCAATAGAAGAAGAGCTACTTAGAGGGCGTGACATGGCAAACCAATTGCTTGAAGTGCTTGTTGCTCAAAACAAATCCAATAGTAATAATAATGATGATCATGATGATGATGATAAAGGGTTAATGGTATTATTAACATATAGTGAAGATCTTGTGCATCAAGTACTAAGATCATTCACCAATTCCCTTTTGATCTTGAACACTAATAAAATTAGTGGTGGTGTTGTTGATGATGATGTTTTCTCCGATGGAGGCGTGGTTGTTGATGATCCTACAAAGTTCAGAGATTTCTCTTCTACTACTTCTCCGAGTCTTCACACAAAAAATAATCGCAAGAGAAAATCATCTGTTCCAACTTGGGAGAAGGACACTCCAATTTTAATTGAAGATGGACATGAATGGAGAAAATATGGACAGAAGGTGACAATGAATTCAAAATACCTAAGGCATTATTATAGGTGCAGTCATAAGAATGATCAAGGTTGTCCAGCAACCAAACAAGTTCAAAGAATTAAAGAGAATCCTCCATTGTTCCGAACAACCTATTTTGGTCACCACACTTGCAAGAGCACTTATTATGAGGAATCAATTTTGGAACCTGAATCTTTTTCTGGATCTTCTATGTTCCTTAGCTTCAATAATAACAAAAATATTATTACTCCTAGCAAAGAACATGTACACCATCTTTCATCATCATCACAAGCTTTTGAATCTGCAAACCATATTATCTCCCAAAACCAATTATTACTATCCTCATCAAATTACTACCACCCATTTTGTGACTATGAAGAACTTGGTTTCAATTATTCTAAGTATAATGATCATGTCCTATCATCCACAGATGAAAAGGTTCACTTTGATCATCATGCTTTTGGGGGGGACTTATTGGATTTTGATGGCATGCAATTTTATGGTCAACAAAACTAA 945 0.3513 MENQRKAIEEELLRGRDMANQLLEVLVAQNKSNSNNNDDHDDDDKGLMVLLTYSEDLVHQVLRSFTNSLLILNTNKISGGVVDDDVFSDGGVVVDDPTKFRDFSSTTSPSLHTKNNRKRKSSVPTWEKDTPILIEDGHEWRKYGQKVTMNSKYLRHYYRCSHKNDQGCPATKQVQRIKENPPLFRTTYFGHHTCKSTYYEESILEPESFSGSSMFLSFNNNKNIITPSKEHVHHLSSSSQAFESANHIISQNQLLLSSSNYYHPFCDYEELGFNYSKYNDHVLSSTDEKVHFDHHAFGGDLLDFDGMQFYGQQN 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91427g00003 314 ProSiteProfiles WRKY domain profile. 129 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc91427g00003 314 Gene3D WRKY domain 114 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc91427g00003 314 SMART WRKY_cls 134 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc91427g00003 314 SUPERFAMILY WRKY DNA-binding domain 131 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc91427g00003 314 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 230 IPR044810 GO:0003700
Stsc91427g00003 314 MobiDBLite consensus disorder prediction 104 124 - -
Stsc91427g00003 314 Pfam WRKY DNA -binding domain 135 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91427g00003 Stsc-Chr91427 11076 13063 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91427g00003 54 204 WRKY Transcription Factor Family AT5G22570 40.132 1.52e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc91427g00003 WRKY 3.3e-23 CL0274