Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91406g00001 ATGAATAGAGGTGTTGTTCAGAGCTCGCCGGTGCAACAAATGATGGCGGCCGGAAACCCTAACTGGTGGAACATCAATAACATGAGGCCTCCTCTTCCACAACCTCCTCCTTTCTTGTCTAATACTACTAATAATTCTTCAAACTTTCTCACCCAATATTCTTCTTCTTGTTCACCTTCTCTTGCTTTGCCTCCTTCTTCTTGGCATGAAAATCAAGAACTTCCTGAGTCATGGAGCCAGCTACTCATGGGTGGACTTGTGGCTGAAGAAGATCATCATCATCAAATGCTAAGTCATCACCACCACCATCATCATCAAGCTACAAATAACAATAATGCTTCTCTTGTTGATGTTAAGCAAGAAAGTTCAGTTAACAGCTATGTATATGGGCATGGTGGTGGAAATAATGAAGAACTTCAGCCATCAAAGGCTGCATCTTGGTCTCCAAATTCATGTGTCACAAGCTTCAGCAGCAACATGCTTGACTTTTCAAGCAATAATAATAATAATAATAAGACTAATGTTGATGCAAGGCATCCACCACCACCACCACCAGATAGATCATCAGAGTGTAACAGCAGTGCAAGTGGTGGTGGGGCAATGAAGAAAGCTAGGGTTCAACCCTCCACAGCTACTCAATCCACCTTCAAGGTCAGGAAGGAGAAGTTAGGTGACAGAATTACTGCACTTCATCAGCTGGTTTCCCCATTTGGGAAGACTGACACAGCCTCAGTGTTGTTAGAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAGGCGCTTAGTTTACCATACTTGAGTAATGGATCAGGGAACACAAGGCATCAACAACATTCTGTTCACCAGGGAGAGAAAAATTGTTTATTCCCTGAAGACCCTGGTCAGCTACTCCATGAAAACTGCTTGAAGAGGAAAGCACCTACTTGTGACAAGGATTCTCAAGAAGAGCCTAAGAAGGACCTAAGGAGCAGAGGGTTGTGTTTGGTTCCAGTTTCATGCACACTTCAAGTTGGAAGTGACAATGGTGCTGACTATTGGGCACCTGCACTTGGTGGAGGTTTTCGGTAG 1074 0.4367 MNRGVVQSSPVQQMMAAGNPNWWNINNMRPPLPQPPPFLSNTTNNSSNFLTQYSSSCSPSLALPPSSWHENQELPESWSQLLMGGLVAEEDHHHQMLSHHHHHHHQATNNNNASLVDVKQESSVNSYVYGHGGGNNEELQPSKAASWSPNSCVTSFSSNMLDFSSNNNNNNKTNVDARHPPPPPPDRSSECNSSASGGGAMKKARVQPSTATQSTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLSNGSGNTRHQQHSVHQGEKNCLFPEDPGQLLHENCLKRKAPTCDKDSQEEPKKDLRSRGLCLVPVSCTLQVGSDNGADYWAPALGGGFR 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91406g00001 357 Gene3D - 210 269 IPR036638 GO:0046983
Stsc91406g00001 357 MobiDBLite consensus disorder prediction 163 217 - -
Stsc91406g00001 357 MobiDBLite consensus disorder prediction 128 148 - -
Stsc91406g00001 357 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 217 268 IPR036638 GO:0046983
Stsc91406g00001 357 FunFam transcription factor bHLH68 isoform X1 214 267 - -
Stsc91406g00001 357 CDD bHLH_AtbHLH_like 215 264 IPR045239 -
Stsc91406g00001 357 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 80 339 - -
Stsc91406g00001 357 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 207 256 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91406g00001 Stsc-Chr91406 5823 11499 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91406g00001 1 298 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 45.352 4.77e-71 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91406g00001 - - gmx:100785156 426.017