Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91404g00004 ATGTTGAGTACAGATGTACCGAACAATGATCCAATGGACCTTAGTCGTGAGAGGGAGAAGACAATGAGAATGAGAGAGAAAGTGTTCCTTCCGAGGGGAAGCACTCGGAAGAGTCCGAGAGCTAGATCCGAAGAAGATCAGATCCATAACAACACATTGGGGGCATCGCGGCGGCTGCAGGACCTGCAATCCCAAGCAGCGAAGAAGATCTGCGTCGACTGCTCTAAGAAGAACCCATGGTGGGCCTCCATCTCCTATTACGTCTTCGTGTGCCTCGAATGCCCAGCAAGCATCACGATCTCGGCGTCCACATCTCCTTCGTCAGATCAGTCACCATGGACTCGTGGTCCAAAATCCAGATCAAGAAGATGGAATCCGGCGATACGCAAAACCTCATCTTCTCTCTCTATCAATCTCTCTTTCTCTGTCCGTTTAAGTTGTGGATTAGGTGTGGGTGGTGCGTCTATGTTGCTGTTGTGGGTTAGGTGTGGGAGGGGTGGGATGGTGCCTTTGCATTGGTGA 522 0.5096 MLSTDVPNNDPMDLSREREKTMRMREKVFLPRGSTRKSPRARSEEDQIHNNTLGASRRLQDLQSQAAKKICVDCSKKNPWWASISYYVFVCLECPASITISASTSPSSDQSPWTRGPKSRSRRWNPAIRKTSSSLSINLSFSVRLSCGLGVGGASMLLLWVRCGRGGMVPLHW 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91404g00004 173 MobiDBLite consensus disorder prediction 11 47 - -
Stsc91404g00004 173 Gene3D Arf GTPase activating protein 41 108 IPR038508 -
Stsc91404g00004 173 MobiDBLite consensus disorder prediction 102 124 - -
Stsc91404g00004 173 Pfam Putative GTPase activating protein for Arf 57 96 IPR001164 GO:0005096
Stsc91404g00004 173 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD6-RELATED 54 94 IPR044519 GO:0005096|GO:0016192
Stsc91404g00004 173 MobiDBLite consensus disorder prediction 102 118 - -
Stsc91404g00004 173 SUPERFAMILY ArfGap/RecO-like zinc finger 57 95 IPR037278 -
Stsc91404g00004 173 ProSiteProfiles ARF GTPase-activating proteins domain profile. 56 94 IPR001164 GO:0005096
Stsc91404g00004 173 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91404g00004 Stsc-Chr91404 23643 24855 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91404g00004 57 94 C2H2 Transcription Factor Family AT4G21160 44.737 3.72e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91404g00004 K12492 - atri:130818773 73.559