Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91397g00004 ATGGCATCAAACAGGGGTCAAGGTGGAATTCAACAGTTGTTGGCTGCTGAGCAAGAAGCGCAAAGGATTGTGAATGCTGCTAAGAATGAAAAATTGGCAAGGTTGAAACAAGCCAAGGAAGAGGCAGAAAAGGAAGTTGCAGAATACAGAGCTCAATTAGAACGTGACTTTCAACAGAAAGTTTCAGACAGTACCGGAGATTCTGGCGCTAATGTGAAGCGCCTTGAGCAGGAGACTGAAGAGAAAATCCATCACCTGAAAACAGAGGCCGCAAGAATTTCCGATGATGTTGTGGCCATGCTTCTCAAGTATGTAACAAGCGTGCAAAATTAG 333 0.4444 MASNRGQGGIQQLLAAEQEAQRIVNAAKNEKLARLKQAKEEAEKEVAEYRAQLERDFQQKVSDSTGDSGANVKRLEQETEEKIHHLKTEAARISDDVVAMLLKYVTSVQN 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91397g00004 110 Coils Coil 10 59 - -
Stsc91397g00004 110 Pfam Vacuolar (H+)-ATPase G subunit 7 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Stsc91397g00004 110 Gene3D - 1 110 - -
Stsc91397g00004 110 Coils Coil 76 96 - -
Stsc91397g00004 110 NCBIfam V-type ATPase subunit G 3 108 IPR005124 GO:0016471|GO:0046961|GO:1902600
Stsc91397g00004 110 FunFam V-type proton ATPase subunit G 3 110 - -
Stsc91397g00004 110 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 1 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91397g00004 Stsc-Chr91397 8718 9933 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91397g00004 1 110 Primary Pumps ATPases(2) AT3G01390 73.636 3.95e-45 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91397g00004 K02152 - gmx:100306550 175.252