Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91397g00002 ATGAAGGGAAGGCTTGCAGATGGGAGTTTGGTGGCTGTGAAAGTGGTTTCAATAGAGGTGGAATCCATGCGAGGAGAGAGTGAATTCGTGGCAGAATTGGCTTCCCTTGCAAATATCAGGCACCAAAATCTTGTGAGACTGAGAGGGTGTTGCGTGGAAGGAGCTCGTAGATATTTGGTGTATGATTACATGCACAACAACAGTGTTTACCACACTTGTTTGTGTTCCCAGGAAGGAAGGATCAGATTCAAGTGGGAAGCAAGAAGGCAAGTATCCAGAGGTGTCGCTCATGGCCTTGCCTATCTTCATCACCAACTTACGCCTCATCTTGTCCACAGAGACATCAAACCAACCAACATACTCCTTGATTCTAATTTTCTTCCTAACATTTCCGATTTTGGCTTAGCTAAGCTCTTCACAGACGATAAGTCTTACATTACTACTAAAGTCGCAGGAACTCTGGGTTATCTTGCACCCGAATATGCCACTTCTGGACAAGTCACACGAAAATCTGATGTTTATAGTTTTGGAGTTCTGTTATTACAAATTGTTACTGGTTTACCAGCTGTAGATGCCTATCAAGATATTGATCGTTTCATTGTAGAAAAGGCATGGAAAGCATATGAAGAGAAGGACCTAATAAGAATGGTGGATCCTACGCTTAATAATATGAACGTTTGGGCGGAAGAGGTCGTTAGATTCTTGAAGGTGGGTTTGCTTTGCGTGCAAGAAACAACAAAGCTGAGGCCAACAATGTTAGGGGTTGTGGAGATGTTGACCAACGACAATGTTGACATGGAAGACATTCGCATTTCGAAACCTGGCTTTGTTGCTGATCTTAGGAACATTAGAATCAAGAAACAAGAAGGAGCAATAAACTCATCAAAGGAATCAAGCTACAGTGGAGCTGCAAGTCCAAGCTCTATTTTTACTACTACCATGAACGTTGGTCGTTAG 957 0.4263 MKGRLADGSLVAVKVVSIEVESMRGESEFVAELASLANIRHQNLVRLRGCCVEGARRYLVYDYMHNNSVYHTCLCSQEGRIRFKWEARRQVSRGVAHGLAYLHHQLTPHLVHRDIKPTNILLDSNFLPNISDFGLAKLFTDDKSYITTKVAGTLGYLAPEYATSGQVTRKSDVYSFGVLLLQIVTGLPAVDAYQDIDRFIVEKAWKAYEEKDLIRMVDPTLNNMNVWAEEVVRFLKVGLLCVQETTKLRPTMLGVVEMLTNDNVDMEDIRISKPGFVADLRNIRIKKQEGAINSSKESSYSGAASPSSIFTTTMNVGR 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91397g00002 318 Gene3D Transferase(Phosphotransferase) domain 1 65 273 - -
Stsc91397g00002 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 110 122 IPR008271 GO:0004672|GO:0006468
Stsc91397g00002 318 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 297 - -
Stsc91397g00002 318 Pfam Protein kinase domain 6 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91397g00002 318 SUPERFAMILY Protein kinase-like (PK-like) 2 260 IPR011009 -
Stsc91397g00002 318 ProSiteProfiles Protein kinase domain profile. 1 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91397g00002 318 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 64 268 - -
Stsc91397g00002 318 Gene3D Phosphorylase Kinase; domain 1 1 64 - -
Stsc91397g00002 318 SMART serkin_6 1 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91397g00002 Stsc-Chr91397 284 2001 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91397g00002 2 314 Receptor kinase-like Gene Family AT1G56120 40.446 4.15e-73 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc91397g00002 Pkinase 3.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91397g00002 - - gmx:100813945 424.476