Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91397g00001 ATGCGAGGAGAGAGTGAATTCGTGGCAGAATTGGCTTCCCTTGCAAATATCAGGCACCAAAATCTTGTGAGACTGAGAGGGTGTTGCGTGGAAGGAGCTCGTAGATATTTGGTGTATGATTACATGCACAACAACAGTGTTTACCACACTTGTTTGTGTTCCCAGGAAGGAAGGATCAGATTCAAGTGGGAAGCAAGAAGGCAAGTATCCAGAGGTGTCGCTCATGGCCTTGCCTATCTTCATCACCAACTTACGCCTCATCTTGTCCACAGAGACATCAAACCAACCAACATACTCCTTGATTCTAATTTTCTTCCTAACATTTCCGATTTTGGCTTAGCTAAGCTCTTCACAGACGATAAGTCTTACATTACTACTAAAGTCGCAGGAACTCTGGGTTATCTTGCACCCGAATATGCCACTTCTGGACAAGTCACACGAAAATCTGATGTTTATAGTTTTGGAGTTCTGTTATTACAAATTGTTACTGGTTTACCAGCTGTAGATGCCTATCAAGATATTGATCGTTTCATTGTAGAAAAGGCATGGAAAGCATATGAAGAGAAGGACCTAATAAGAATGGTGGATCCTACGCTTAATAATATGAACGTTTGGGCGGAAGAGGTCGTTAGATTCTTGAAGGTGGGTTTGCTTTGCGTGCAAGAAACAACAAAGCTGAGGCCAACAATGTTAGGGGTTGTGGAGATGTTGACCAACGACAATGTTGACATGGAAGACATTCGCATTTCGAAACCTGGCTTTGTTGCTGATCTTAGGAACATTAGAATCAAGAAACAAGAAGGAGCAATAAACTCATCAAAGGAATCAAGCTACAGTGGAGCTGCAAGTCCAAGCTCTATTTTTACTACTACCATGAACGTTGGTCGTTAG 891 0.422 MRGESEFVAELASLANIRHQNLVRLRGCCVEGARRYLVYDYMHNNSVYHTCLCSQEGRIRFKWEARRQVSRGVAHGLAYLHHQLTPHLVHRDIKPTNILLDSNFLPNISDFGLAKLFTDDKSYITTKVAGTLGYLAPEYATSGQVTRKSDVYSFGVLLLQIVTGLPAVDAYQDIDRFIVEKAWKAYEEKDLIRMVDPTLNNMNVWAEEVVRFLKVGLLCVQETTKLRPTMLGVVEMLTNDNVDMEDIRISKPGFVADLRNIRIKKQEGAINSSKESSYSGAASPSSIFTTTMNVGR 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91397g00001 296 Gene3D Phosphorylase Kinase; domain 1 1 41 - -
Stsc91397g00001 296 ProSitePatterns Serine/Threonine protein kinases active-site signature. 88 100 IPR008271 GO:0004672|GO:0006468
Stsc91397g00001 296 Gene3D Transferase(Phosphotransferase) domain 1 42 251 - -
Stsc91397g00001 296 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 42 246 - -
Stsc91397g00001 296 SMART serkin_6 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91397g00001 296 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 2 275 - -
Stsc91397g00001 296 ProSiteProfiles Protein kinase domain profile. 1 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91397g00001 296 SUPERFAMILY Protein kinase-like (PK-like) 4 238 IPR011009 -
Stsc91397g00001 296 Pfam Protein kinase domain 5 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91397g00001 Stsc-Chr91397 189 2001 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91397g00001 2 292 Receptor kinase-like Gene Family AT1G56120 39.384 8.57e-69 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc91397g00001 Pkinase 1.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91397g00001 - - gmx:100813945 393.66