Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91384g00005 ATGCACGACATGTTATCGGCGATAGAGAGGTACAAGGCGACGTACCTGCCGCTGGTGCCGCCGATTCTGGTGGCGATGCTCAACAACGCTGAGGCGATTAAGGGGAAGTATGATTTGAGGTCTTTGCATTCGGTGCTTTCGGGTGGAGCTCCGCTTAGCAAAGAGGTGATTGAAGGCTTCGTGGAGAAGTATCCCAACGTGACAATTCTTCAGGGTTATGGCTTGACGGAGTCCACCGGAGTTGGTGCTTCCACCGATTCATTGGAAGAGAGCCGCAGGTACGGCACGGCGGGGCTCCTCTCTCCGGGAACTGAGGCTAAGGTTGTTGATCCTGACTCCGGCGTCGCCCTTCCCGTGAACCGGACCGGTGAGCTTTGGCTCAGGGGTCCCACCATCATGAAAGGTTATTTCAGTAACGAAGAAGCAACGGCATCTACACTTGATTCAGAAGGATGGTTAAGAACAGGGGATGTTTGCTTCATCGACAATGATGGCTTCATATTTATTGTGGATAGGTTGAAAGAGCTCATCAAGTACAAGGGATATCAGGTGCCTCCAGCAGAACTAGAGGCCTTCTTCCCAGATAAGGAGGCTGGCCAAATTCCAATGGCCTATGTTGTAAGAAGGGCTGGAAGCACCATTTCAGAGAAGCAAGTCATGGATTTTGTTGCAAATCAGGTGGCTCCATACAAAAGAATTCGAAAGGTTGCTTTTATATCTTCTGTACCCAAAAATCCATCTGGCAAAATTCTAAGGAAGGATCTCATTAAGCTTGCAACCTCTAAACTCTGA 792 0.4937 MHDMLSAIERYKATYLPLVPPILVAMLNNAEAIKGKYDLRSLHSVLSGGAPLSKEVIEGFVEKYPNVTILQGYGLTESTGVGASTDSLEESRRYGTAGLLSPGTEAKVVDPDSGVALPVNRTGELWLRGPTIMKGYFSNEEATASTLDSEGWLRTGDVCFIDNDGFIFIVDRLKELIKYKGYQVPPAELEAFFPDKEAGQIPMAYVVRRAGSTISEKQVMDFVANQVAPYKRIRKVAFISSVPKNPSGKILRKDLIKLATSKL 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91384g00005 263 Gene3D - 175 262 IPR045851 -
Stsc91384g00005 263 Pfam AMP-binding enzyme C-terminal domain 194 249 IPR025110 -
Stsc91384g00005 263 Pfam AMP-binding enzyme 4 179 IPR000873 -
Stsc91384g00005 263 SUPERFAMILY Acetyl-CoA synthetase-like 3 260 - -
Stsc91384g00005 263 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 2 257 - -
Stsc91384g00005 263 Gene3D - 1 174 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91384g00005 Stsc-Chr91384 26425 28118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91384g00005 1 263 Monolignol Biosynthesis Gene Families AT1G20500 66.065 4.21e-134 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91384g00005 K10526 - gmx:100811344 468.774