Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91384g00003 ATGGCAAAGAAGTCCCAAAGACGCTCCATCAGGTATGAGAAAGATAAGTCAGGCTGTATGTGGGGCTTTATTAGCATGTTTGATTTCCGCCATGGTCACTCAACTCGCAAGTTGATTGCGGATAGGAGGCGAAGCAGCAAGCATGCTGTTGGAGGTGTGCCTTCTAATAATAACAAGTTTGAGATGTTGAGCAATTTGGATGAAGTTTCTCATGGCAATTTTGACACCGGAGAGAGTAAGAGACCAACAGTGAAAACTGGTGCTATTAAGCACAGTGTGAAGAAACTCATAGAAGAAGAGATGTTCATTGATCAAACTGCAGAGAAAGATGTATCTAATGCTGCACAGCAGACGGATTACAAAAGGAAAAAGAAATCTAGCAGTAAAAGCTGTGATATGGACATTAATATGAATTTGGGTGCAACCTTGAAATCCAACTACTTGCATAATCAACACTCTCGTCGGCAATCAAAAGATAATCTTGATCTGGATAACATAATTGAAGAGTTTTGTCAATTTAAAGATTCTTGTTCTGTGAAGCATGGCAATGATGGAGGAGTTCATACTCAACCAAACCAGAAGCATGCAATTTCTGAAAACATTGCAAGAGAGGTAATTCATGAATTTGTGAATCAGATGATACTGAATGGCAAAGATCTGGCAGAAGCTAGAAAATTCCTTCATTCACATGAACTTATAGAAGCACCTCAACTTATAAGTTCAGACAAGGAATTGTTTCTTGCACTTCTACAAAACCCAAATTCACTTCTATTGAAATGTATACAAGAGTTTGCAAATTCCCAGGGGAGAGATAACAAGGAATATAGTTCTGTTACTTGTTCCAGCTTCACCGAACAAGATCCTGGAAATGTAGAACAGACAAGGGAGACTGTAAACCACAAGAAGCATAACTTCTTCAGGAAGAAAACAAAGTCTCAGCCAAAAAATCAAACAAATGAGAATGGCAAAACTGAAACTTCAAATAGAATTGTCATTCTCAAGCCTGGATCAATGGGGTTGCAAAATTCTGAAGCTGGAAACAACATTGCCTCTTCCCTGCAGTCTCATCATGATACTGCCAAACACAGTGGTCCTTCTGCAAGAGGTAATTCACATTTTTCGCTTACAGATTTAAAAAACAAGTTGAAGCATGCAATGGGGAGAGAGAAACATTCAAATCCTGAAGGCACCTCAAAAAGATACCCTGCTGAGTCTCAAAGACCTAGCAACAAATCCATCCTTAAAGACAATGTTGGAATGAGATCTCCTAATAAAGATCATTTCTTCCTCGAGAAAATTGCAAGGCCTACTAAACCGAAAGATCCGGACTTGATTTTCGAGCAAGAAAGTGGTAGCTATCGGAAGAAAAGGGCACCTAACTTATACACTGAGGCCAAGAAACATTTGTCTGAGATGATAAGTAGTGGGGATGAGAACATGGACATGTCAAGTAGGCAGATTTCCAAGACTCTTGGGAGAATTCTATCCCTTCCGGAGTACCACTTTTCTCCACTTGGTAGTCCTGCAAGTGATTGGGAGCATCATTTTGTGGCTGGACAGACAAGATTTTCAACCTCGGATAAAACTTGGGAGGCTTATCAGAACATGTCCCCAAAACAGGCAACCTTTGTAAATAATTTATATCAGGAGTCTGATAATCCAGAGAAGCAGTCAAGTATTTGTGACAGAAGCTCTAATAATATAGCACAAGAAATTAAGTTTGAATCCAATATTCCTGATGAACTTAGTCATGTTGATAAAGCAGAAGGCTATTGTGCTGTTAACGACGAGATTGTTGTCAAAGGTGATGTAGAATCTGAAAGAGAGATCAATATCTTGGAATCTTCCTCAGAACTAGTTTGCCTCAGCATTGGAGATGAGGAGCAGAGCTATGATATCTTAGAAATTACAGATAGTGAAAGATCTTCTCAATGCTTCACCCAAGACAGTATAGGCGAAAACCAACAATCTACTCCACCATCTTCTTCTTACTCTTCATTCAAAAAGAAAAGTGAAGAGCTAGAAAGTGGTGCAGAAGTGTGTGGAAGGCCAAGTCCTGTATCTGTACTTAATGCACCATTCATAGAGGATGAAATCAGCCCCGGATATCAACCTATTCAAGTAGCAGTGCGGCCGCTACATATCCAATTCGAAGAACAAGATTATTCACCTGTGAACGGAATCCACAAAGGAAAATATTGCCTTGAAGAAAATGAATTGATATACAAGTACATCAAAGCAGTCCTGCAAGCCTCTGAATTGACTACTGATCAATTGTTGATGAAATGCCACTCCTCGGATAAGATACTAGACCCTTCATTGTTTGATAGGGAAGAGCTTCCAGCAAACCAGCTTTGCCATGATCAGAAGCTTCTCTATGACTGTATCAATGAAGTTCTGATGGAGGTTTGTTGGCATTACTTTGCGGTCTCGCCTTTTGTAAATCTTAGCATAAGGTCAAGTCCAAATATGAAAATGGTTGTTCTCAAGGTTTGGGAAGAAATGTGCTGGCATTTCCTTCCCTTACCTCCGCCTCGCACTTTGGACAAAATTGTCAGGAAAGACATGGAAAAAGCTAGTATGTGGATGGATCTTCGGTTTGATGCTGAAGCTGTTGGTTTCGAAATGGGCGAAATGATTCTTGCAGAGCTCATGGAGGATACAATATTGAGTTGTACAGGCAATGTGTAA 2691 0.3995 MAKKSQRRSIRYEKDKSGCMWGFISMFDFRHGHSTRKLIADRRRSSKHAVGGVPSNNNKFEMLSNLDEVSHGNFDTGESKRPTVKTGAIKHSVKKLIEEEMFIDQTAEKDVSNAAQQTDYKRKKKSSSKSCDMDINMNLGATLKSNYLHNQHSRRQSKDNLDLDNIIEEFCQFKDSCSVKHGNDGGVHTQPNQKHAISENIAREVIHEFVNQMILNGKDLAEARKFLHSHELIEAPQLISSDKELFLALLQNPNSLLLKCIQEFANSQGRDNKEYSSVTCSSFTEQDPGNVEQTRETVNHKKHNFFRKKTKSQPKNQTNENGKTETSNRIVILKPGSMGLQNSEAGNNIASSLQSHHDTAKHSGPSARGNSHFSLTDLKNKLKHAMGREKHSNPEGTSKRYPAESQRPSNKSILKDNVGMRSPNKDHFFLEKIARPTKPKDPDLIFEQESGSYRKKRAPNLYTEAKKHLSEMISSGDENMDMSSRQISKTLGRILSLPEYHFSPLGSPASDWEHHFVAGQTRFSTSDKTWEAYQNMSPKQATFVNNLYQESDNPEKQSSICDRSSNNIAQEIKFESNIPDELSHVDKAEGYCAVNDEIVVKGDVESEREINILESSSELVCLSIGDEEQSYDILEITDSERSSQCFTQDSIGENQQSTPPSSSYSSFKKKSEELESGAEVCGRPSPVSVLNAPFIEDEISPGYQPIQVAVRPLHIQFEEQDYSPVNGIHKGKYCLEENELIYKYIKAVLQASELTTDQLLMKCHSSDKILDPSLFDREELPANQLCHDQKLLYDCINEVLMEVCWHYFAVSPFVNLSIRSSPNMKMVVLKVWEEMCWHFLPLPPPRTLDKIVRKDMEKASMWMDLRFDAEAVGFEMGEMILAELMEDTILSCTGNV 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91384g00003 896 MobiDBLite consensus disorder prediction 377 397 - -
Stsc91384g00003 896 MobiDBLite consensus disorder prediction 281 329 - -
Stsc91384g00003 896 MobiDBLite consensus disorder prediction 115 130 - -
Stsc91384g00003 896 MobiDBLite consensus disorder prediction 311 329 - -
Stsc91384g00003 896 MobiDBLite consensus disorder prediction 353 421 - -
Stsc91384g00003 896 Pfam Domain of unknown function (DUF4378) 743 887 IPR025486 -
Stsc91384g00003 896 MobiDBLite consensus disorder prediction 647 669 - -
Stsc91384g00003 896 Pfam Protein of unknown function (DUF3741) 211 255 IPR022212 -
Stsc91384g00003 896 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 892 - -
Stsc91384g00003 896 MobiDBLite consensus disorder prediction 647 667 - -
Stsc91384g00003 896 MobiDBLite consensus disorder prediction 398 417 - -
Stsc91384g00003 896 MobiDBLite consensus disorder prediction 353 376 - -
Stsc91384g00003 896 MobiDBLite consensus disorder prediction 112 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91384g00003 Stsc-Chr91384 18181 21992 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91384g00003 1 875 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.807 1.08e-107 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91384g00003 - - gmx:102667950 1058.13