Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91358g00003 ATGGCTTTATGCGAAATTCAGCTCCACTGCCGCCACCACCACTTGTTCAAGATCAAAAGAAAATCACCCCAGCTCCTTAGAGCCATCTCTGTGAAATCTGTGCAGCCAAAGATTGATTATTTCAAGTCCAAGGGAGTTTCAGACCCTGACATACGCCACATGATAACAAATTGCCCTACAATCCTCGTAAGAAGCTTGAAGAAGGAAATCATTCCCTCCTTTGATTTCTTATGCAGCATGCTTCAGTCCAACCAAAATCTCACAAATGTTCTTATTCGCTTTGGCAAATGTTTACAACCTAATATTGAAGTGCTGAGAGAAGAGGGAGTTCCTGAATCACATGCTGTTAGGTTTATACAATACTTCCCACGCACATTTATGTCATCTTCTAAGAAATTTAAGGAGGCAGTGCAGGCAGTTAAGCAGCTGAAATTTGACCCTTTGAAAATGAATTTTGTTGTTGCTGTTCAGGTGAAGTTAGGAATATAG 489 0.407 MALCEIQLHCRHHHLFKIKRKSPQLLRAISVKSVQPKIDYFKSKGVSDPDIRHMITNCPTILVRSLKKEIIPSFDFLCSMLQSNQNLTNVLIRFGKCLQPNIEVLREEGVPESHAVRFIQYFPRTFMSSSKKFKEAVQAVKQLKFDPLKMNFVVAVQVKLGI 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91358g00003 162 SMART mt_12 16 47 IPR003690 GO:0003690|GO:0006355
Stsc91358g00003 162 SMART mt_12 116 146 IPR003690 GO:0003690|GO:0006355
Stsc91358g00003 162 SMART mt_12 52 83 IPR003690 GO:0003690|GO:0006355
Stsc91358g00003 162 Pfam mTERF 11 154 IPR003690 GO:0003690|GO:0006355
Stsc91358g00003 162 Gene3D Transcription termination factor 3, mitochondrial 97 160 IPR038538 -
Stsc91358g00003 162 Gene3D Transcription termination factor 3, mitochondrial 3 96 IPR038538 -
Stsc91358g00003 162 PANTHER CGI-12 PROTEIN-RELATED 14 159 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Stsc91358g00003 mTERF 3.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91358g00003 K15031 - aew:130763860 124.02