Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91346g00002 ATGGCGGGCAAGTCTGACGCCGTGTCGATCCGCGTTCCGTACAGGAATTTGAGGGAGGATTCCGCCGCACATGAGGTCGAGCTTGTCGGCGTCGATGACGGCAACCATCGCCGCCGGATCTCGCAAAACTCCCACTCTCCTGATGGATCTCCGGTCCCTCATACTCCACCCAAGAAAGCCAGCTTGGTCAATCTGGTACTCAGTTGTACCGTCGCCGCCGGCGTTCAATTCGGCTGGGCCTTGCAGCTCTCTCTCCTCACTCCTTACGTGCAGACGTTGGGTATAGGACATGCATTTTCTTCATTTATATGGCTTTGTGGTCCCATTACAGGCCTTGTGGTTCAACCCTGTGTTGGTATATGGAGTGATAAATGTACTTCGAAGTATGGCAGAAGGCGTCCATTCATTCTGTTAGGATCCCTTATGATTTCCTTGGCTGTTATATTAATCGGGTTTTCTGCTGACATTGGATATGTGTTAGGGGATACAAGTGAGCATTGCAGCACATTTAAAGGCACCCGAACAAGAGCTGCTCTTGTATTTATTCTTGGGTTCTGGATGCTGGACCTTGCCAACAACACTGTTCAGGGGCCAGCTCGGGCACTTTTGGCTGATCTGTCAGGTCCTGATCAACGCAATGTAGCAAATGCTATATTTTGTTCATGGATGGCAGTTGGCAACATCCTGGGATATTCTGCTGGTGCTAGTGGAAAGTGGAACAGATGGTTCCCTTTCTTGACAAATAGAGCTTGCTGTGAAGCCTGTGGCAATCTTAAGGCTGCATTTCTTGTTTCTGTGGTTTTTCTGACATTATGCACACTTGTCACCCTATATTTTGCTGATGAGGTTCCACTTACTACAACTCAGCATCATCGCTTATCAGATTCTGATCCTTTATTGGATGAACAACAAAATGGCTTTGAATTCTCAAAATCAAAGCCTTTATCAAATGACATCAATGGAAAGATAAATGAGGATCACATTGAGAAAGATGTAGAGCTAAAACATGAGAATTTGCAAGCAGGGGAAGATCATAATGAAAACTTTATGGATGGACCTGGAGCAGTATTAGTAAACTTATTGACAAGTCTAAGGCATTTGCCACCTGCAATGCACTCAGTGCTTGTTGTAATGGCTCTCACTTGGTTGTCATGGTTTCCCTTCTTTCTGTTCGATACGGATTGGATGGGGAGGGAAGTTTATCATGGAGATCCAAAAGGGAGCCCTGCTGAAGTAGGTCTTTATGATCAAGGTGTTAGAGAAGGTGCATTTGGTTTGCTGCTGAATTCAATTGTCCTGGGAATTAGCTCGTTTTTCATTGAGCCAATGTGTAACTGGATGGGTGCAAGAATAGTATGGGCAATTAGCAATTTTATCGTCTTTGTTTGCATGGCTGGCACTGCTATAATTAGTCTGATTTCCATCCAAGATCACCCTGGAGGTATTCAACATGCAATTGGAGCAAGTGAAGGAATCAAGGTTGCTTCCTTGGTTGTGTTTGTTCTTCTTGGTTTTCCTCTAGCGATTACCTATAGTGTTCCCTTTGCTGTCACAGCAGAGTTGACTGCTGATTCAGGTGGTGGCCAAGGACTGGCTATAGGAGTTCTAAATCTTGCGATCGTCGTTCCACAGATGGTCATATCCCTTGGTTCTGGTCCATGGGATGCCCTCTTTGGCGGAGGCAACATTCCTGCCTTTGTTTTGGCATCGGTATGTGCTCTAGCAGGCGGCATTATTGCGACTCTCAAACTGCCAGATCTATCTAACAGTTCTTTCAAGTCTTCAGGATTTCACTTCGGCTAA 1803 0.4565 MAGKSDAVSIRVPYRNLREDSAAHEVELVGVDDGNHRRRISQNSHSPDGSPVPHTPPKKASLVNLVLSCTVAAGVQFGWALQLSLLTPYVQTLGIGHAFSSFIWLCGPITGLVVQPCVGIWSDKCTSKYGRRRPFILLGSLMISLAVILIGFSADIGYVLGDTSEHCSTFKGTRTRAALVFILGFWMLDLANNTVQGPARALLADLSGPDQRNVANAIFCSWMAVGNILGYSAGASGKWNRWFPFLTNRACCEACGNLKAAFLVSVVFLTLCTLVTLYFADEVPLTTTQHHRLSDSDPLLDEQQNGFEFSKSKPLSNDINGKINEDHIEKDVELKHENLQAGEDHNENFMDGPGAVLVNLLTSLRHLPPAMHSVLVVMALTWLSWFPFFLFDTDWMGREVYHGDPKGSPAEVGLYDQGVREGAFGLLLNSIVLGISSFFIEPMCNWMGARIVWAISNFIVFVCMAGTAIISLISIQDHPGGIQHAIGASEGIKVASLVVFVLLGFPLAITYSVPFAVTAELTADSGGGQGLAIGVLNLAIVVPQMVISLGSGPWDALFGGGNIPAFVLASVCALAGGIIATLKLPDLSNSSFKSSGFHFG 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91346g00002 600 PANTHER SUGAR TRANSPORTER 59 582 - -
Stsc91346g00002 600 SUPERFAMILY MFS general substrate transporter 65 587 IPR036259 -
Stsc91346g00002 600 FunFam Sucrose transporter SUC2 63 287 - -
Stsc91346g00002 600 Pfam Major Facilitator Superfamily 74 540 IPR011701 GO:0022857|GO:0055085
Stsc91346g00002 600 Gene3D MFS general substrate transporter like domains 61 583 IPR036259 -
Stsc91346g00002 600 CDD MFS_SLC45_SUC 65 580 - -
Stsc91346g00002 600 MobiDBLite consensus disorder prediction 36 55 - -
Stsc91346g00002 600 FunFam Sucrose transport protein SUT5 372 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91346g00002 Stsc-Chr91346 5057 9849 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91346g00002 148 600 Sucrose Transporter Gene Family AT2G02860 70.705 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91346g00002 K15378 - gmx:100793185 1016.91