Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91310g00005 ATGACCACCCAAAACATTGATTGGAAGGGTTCACTTGTGTCTGCTGCAATGCAAGTGGCGTTGGGACGTTTAGACAAAATACTTTATCCAATAGTTTCTCCTGCCGTTCTAGCATTCCTCCGGGGCAACAAAATTGAGGAGCAACTCCTTGAGAAGTTGAAGATGCTGTTGCTGTTAGCTGCCACTGAGCTCAATGATGTCGAGGAAAAGCAGTTCACTGATACATCTGTCAAGGAATGGTTTGATGGCCTTCGAAATGCTGTCTATGATGCTGATGATCTCTTGGATAAGATTTCCACTCTTCAAAACATTGAGGATTCTGCTGAATCTGAAAACAGTGAGGATTCTGCTGGCTGGTTTAAATCTCCTCTTCATTCTGCTCAACAACTGACTTCTACTCTAGACACCATACTTCATTCTCTCACTCCATCTACTTTTAATCTCGAGAAAATACGTCATCTTCTCACTCCATCTGCTCAACAACTGACTTGTAATCTCGACAAGATAGTTGACAAGCTGGAGTTTTTGATTAAGCATAAGGACAGTCTTGGCCTCAATGAAGTCAGCGTTGGTAAGTCACGCTCGTTAGCTTTACCCACAACTTCTTTGGTGGATGAACATCAAGTGTATGGAAGAGATGATGATAAGAAAAAGATTATTGACTTTCTTCCATCTAATGGAGAAGGAGCGGCTGTTGTTGCAATTGTTGGGATGGGAGGGGTTGGTAAAACTACTCTTGCTCGGATGGTGTACAACGACAATCTTTACCAGTTCAAATCATGGACTTGTATTTCAGAGGCATCAGACGTTTGTCAAATAACCAAGAGAGTCTATGAGTCGTTCACCTTGTCGCATCCTAACTTCTCAGACTTGAATGCACTCCAAATCAAGCTTGAAAAGAGATTAAAAGGAAAACGGTTCCTGCTTGTTTTGGATGGGTTTTCTGATGAAAACTCTTTTGACTGGGACACGCTCAGAAGGCCATTCCTCTCAGTAGGCAGTGGAAGTAAAATCATTGTAACAACCCGTAGCCAAAGAGTTGCAAAAGCAGTTCAAGCTGATTTAACTCATCTCCTCTCGCCTCTGGAAGAAGAAGATACGTGGCAGTTATTCTCAAGTTATGCTTTCAAATCTGGGAGACCTACCAACTACCATGTCATAGAAGGAATTGGTAAGGAAATAGCAAAGAAGTGCAAAGGCCTTCCTTTAGCTGCAAAAGCACTCGGGAGCCTTTTACATCAGACGGAGGATGTTGAGGAATGGGAATATGTATGCAACAGTCATATATGGGATTTACCGTGTGGTAAAAGCAGCATACTTCCAGCTTTAAAGTTGAGCTACAGTCATCTTCCTTCGCTATTAAGGCAATGCTTTGTTTATTGTTCTATTTTTCCTAAAGGATATGAAAATGACGAGTGGAACCTGATTTATTTGTGGATGGCTGAAGGTATTCTTCCCAAACCAGAAACTGAGAAGCGAATAGAAGATGTCGGCCATGAATGCTTTCAAGAGTTACTGTCCAGGTCTTTTTTTTAA 1536 0.4173 MTTQNIDWKGSLVSAAMQVALGRLDKILYPIVSPAVLAFLRGNKIEEQLLEKLKMLLLLAATELNDVEEKQFTDTSVKEWFDGLRNAVYDADDLLDKISTLQNIEDSAESENSEDSAGWFKSPLHSAQQLTSTLDTILHSLTPSTFNLEKIRHLLTPSAQQLTCNLDKIVDKLEFLIKHKDSLGLNEVSVGKSRSLALPTTSLVDEHQVYGRDDDKKKIIDFLPSNGEGAAVVAIVGMGGVGKTTLARMVYNDNLYQFKSWTCISEASDVCQITKRVYESFTLSHPNFSDLNALQIKLEKRLKGKRFLLVLDGFSDENSFDWDTLRRPFLSVGSGSKIIVTTRSQRVAKAVQADLTHLLSPLEEEDTWQLFSSYAFKSGRPTNYHVIEGIGKEIAKKCKGLPLAAKALGSLLHQTEDVEEWEYVCNSHIWDLPCGKSSILPALKLSYSHLPSLLRQCFVYCSIFPKGYENDEWNLIYLWMAEGILPKPETEKRIEDVGHECFQELLSRSFF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91310g00005 511 Gene3D - 361 451 IPR042197 -
Stsc91310g00005 511 Coils Coil 91 111 - -
Stsc91310g00005 511 Pfam Rx N-terminal domain 47 106 IPR041118 -
Stsc91310g00005 511 Gene3D - 15 137 - -
Stsc91310g00005 511 PANTHER DISEASE RESISTANCE PROTEIN RP 65 511 IPR044974 GO:0006952
Stsc91310g00005 511 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 196 461 IPR027417 -
Stsc91310g00005 511 Gene3D - 194 357 IPR027417 -
Stsc91310g00005 511 PRINTS Disease resistance protein signature 232 247 - -
Stsc91310g00005 511 PRINTS Disease resistance protein signature 301 315 - -
Stsc91310g00005 511 PRINTS Disease resistance protein signature 398 412 - -
Stsc91310g00005 511 Pfam NB-ARC domain 213 426 IPR002182 GO:0043531
Stsc91310g00005 511 Coils Coil 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91310g00005 Stsc-Chr91310 22324 23859 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91310g00005 233 486 WRKY Transcription Factor Family AT5G45050 26.692 4.58e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91310g00005 - - aip:107632529 751.895