Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91298g00005 ATGTATGATGTTTTTTTGAACTTTAGAGGCGAGGATACAAGGTTCGCATTCACAGATTATCTCTATCATGGACTGGCTGACGTTAAAAAACTCCAAGTATTCAGAGATGATCCGGGTCTGGAACTAGGTGACGAAATTAAACCTGCTCTGATGGAAGCCATTAAGAGATCAAGGATGTTCATTGTTGTCATGAGTGAAAACTATGTATCTTCGTCATGGTGCCTCCTGGAGCTAGAGGAGATGCTCAAGTATTCCAACAATGGAACAAAACGGCTCCTTGTCCCAATATTTTATCGCGTGGCGCCAGCAGAAGTGAGATATCAGATTAGCATCAAATCTAAGGAAGCCATGAAGAAACATGAAGAAAGACATGGCAAAGACAAGGTGTTAGCGTGGAAGTCTGCTCTGTCTACAGTTTGCGGGCTAAGCGGAGAACACATTCTTGACAAGGGAGATCATTATGAAACCGAGGTCATAGGCAAGGTTGCTGAACAAGTGTCTGCAAAACTTGTAGAGGTAAAGCAACAATTAAATGCATTTGGTTCTCAATTTGAAGAGGTCGAATCACTTTTGAACCTTGAATCCTGTGATACTGTTGGTACGGTGGGAGTTTATGAAGATCCTAAGATAGGCAAAAGTCACATAACAACATTTGCTTTTGAGCTATACTATAAGATCAAATATGAGTTCAGAGCAGCAAGTTTTCTTGTTCATGTTAGTAAAAAATTAAAGGAAAACGCCACTAGTGGCTTGGAAAACCTACAAAAGGAGCTTCTTTCTGATATGGGTGTGAAGGCAAGCAGCAAGCAGGAGTTGCAGCATAAAAGAGTGCTTGTGGTTCTGGAAGGGGTTGATAGTAAAGAGCATTTGGAGTTGCTATTAGTGGGAATGGGAATATGTGATTTGTTTGGTCCTGGTAGTAGGATCATCATAACAACAGAAAACAAAGATCTCTTTGAGAATTATTCCAGTGTGATGAAAGGTGTTGAGCTTAAGACACATTGCATTCGTGAAGGTGAATTCGTTGGCAGCAAATGGATAGTTAAAGAAAAGAATGTAGTGGGATTTGTGAAGGATTTCATCCATGTAATTAATCAACTGAGGGAAGAGGATTCAAAGGGGAGGAATGTTGTCTCCATTGTCGGCATGGGTGGGTCGGGCAAGACTACCCTTGCCCGAAAGGTCTACGACAGCAGTGAGGTCAGGAATGTATTTCCTTGCCGTGCATGGGCAACTGTCTCCAAAGATTATAGAGAAAAGGAAGTTTTCTCAAGCCTTTTTCGTTCTCTGATGCCATCCACACCTGTACCTGAAGCTGAAGAAGAGTTGAAGAGGAAGGTGAGAAGATTTTTGAAGGAGCAAAGGAGAAAGTATTTGATAGTGCTTGATGATGTGTGGGACACTCAGGTGTGGGACAAGTTGAAGGATTATCTCCTACCAAATAAGAATAATGGGAGCAGGATATTGGTGACTACAAGAAATAATCAAGTGGCAAACTATGCACGGTCAAAGGAGCCTCACCATGAACCTAGCCGTTTGAATGAAGAAGAAAGTTGGGAATTGCTTTCCAGCGAGGTGTTTTGTGGAGAAGAGTGTCCTGCTGAGTTAGAGTCTATTGGCAAATCAATTGCGAAAAGTTGCAAGGGTTTGCCGTTGGCTATTGTGACCATAGCAGGGGTTATCAAAAAGAGGGAGAGATCAAAAACAGAGTGGAAAAGAATTGAGAATTTAACTCTTTCTTGTTGTGTTGATGAGGATATCGAGCGGATGAAGAAGATATTGAAGATGAGCTATGATTATTTACCTGAAAACTTGAAGCCATGCTTTCTATATCTTGGTGTCTTTCCGGAAGATTGCAAGATTGTGGCGAGGGAGTTAATCGAACTATGGATGGTAGAAGGCTTGATAAAAGTAAGAGGAAGTGGAAGATCAAAAGCACCACAGCCTGAAGATGTTGGTGAGGAATACTTGAAGGCATTAGTGGATCGTAACTTGGTACAGGTGGTAAAGAGAAAGAGTGATGGGGAAGGGGTGAAAACGTGCCAGATCCACGATCTCTTTCGAGACATGTGCATAGAAGAGAGCGAAGACAGCAGTTTGGCTTTGGACTTCCCCTGCAACGGAGAGTCCTATCTGTGTTCAGTAACATGTGAGAAATCACACACTTGTTCGTTTCTCTATTTTGGAGTTAAAGCAGTAGAGTGGTCAAGCCGTATTCCGGAAGGGGAAAACTTGCGAGCTAACGTGCTTTACTTTTCAAATTCCACCTTAGTACCATATGAGAATGATACGGACAAGTTCACCCATCTAAGGTACTTGAGAATGTTATGGCCGCTTTTTGCGATATCTTCCCTTTACAATTTAGAAACACTGGATATAAAGATGCCATCTTCGATATTAACCATAACAATTGGGGAGTTTAAGCAACTGAGGCATCTTCGTTGTCATGGTCGTGTGGAGCTACAAGGTAGCAGCAACAAATTACAAAATCTCCAGACCCTATATTATGTGAGTCCTGATTCAGTACTAGAGTCCCTCATCAACGGTGGTTGCTTTCCCAACTTGAAAACATTGGGTTTAGTATTATATTCAGGGGACGAGAAAGGTAGGGTTGAAGAACTAAGGAGATTGCAGGGCCTAAAGAATCTAAGCAAGCTGAAATTAAGGTTTAATGTCAAGAAGCGGATTCTCATGCCAGCACTTTCAGTTGCAGCAGTTGAATTTCTGTCCAACCTTACCAAGATTACTTTGGTGTACCCTAGGGATTTCAACTCCAGAGACATGGCTGCTTTAGGACGGATTCCCAACCTGGAAACTCTGAAATTATGTCAGGAAAGATGGACAGAAACTCTTAGTTGTGGTGAGGCTGGGAGTTTCCCAAAGCTTCAAGTGTTTCTCATGATAGATGTAAGCAGTCTCAAATGTCTTACTCTAGAAGAAGGTGTGATGCCTTGTCTTCGACGCGTGGTCATCTCTGATTGTTGTCTTTTGAAGGAGATTCCTGAACGGCTGTTATCCTTGAGTAACTTACGCCATCTGCATGGTAATATCTGGGAAGAAGCTGAAAATGACTCCAACAAGTATGAGCTTATTAGGAGAACTCCAACATCTTCATATAGCTGA 3123 0.4201 MYDVFLNFRGEDTRFAFTDYLYHGLADVKKLQVFRDDPGLELGDEIKPALMEAIKRSRMFIVVMSENYVSSSWCLLELEEMLKYSNNGTKRLLVPIFYRVAPAEVRYQISIKSKEAMKKHEERHGKDKVLAWKSALSTVCGLSGEHILDKGDHYETEVIGKVAEQVSAKLVEVKQQLNAFGSQFEEVESLLNLESCDTVGTVGVYEDPKIGKSHITTFAFELYYKIKYEFRAASFLVHVSKKLKENATSGLENLQKELLSDMGVKASSKQELQHKRVLVVLEGVDSKEHLELLLVGMGICDLFGPGSRIIITTENKDLFENYSSVMKGVELKTHCIREGEFVGSKWIVKEKNVVGFVKDFIHVINQLREEDSKGRNVVSIVGMGGSGKTTLARKVYDSSEVRNVFPCRAWATVSKDYREKEVFSSLFRSLMPSTPVPEAEEELKRKVRRFLKEQRRKYLIVLDDVWDTQVWDKLKDYLLPNKNNGSRILVTTRNNQVANYARSKEPHHEPSRLNEEESWELLSSEVFCGEECPAELESIGKSIAKSCKGLPLAIVTIAGVIKKRERSKTEWKRIENLTLSCCVDEDIERMKKILKMSYDYLPENLKPCFLYLGVFPEDCKIVARELIELWMVEGLIKVRGSGRSKAPQPEDVGEEYLKALVDRNLVQVVKRKSDGEGVKTCQIHDLFRDMCIEESEDSSLALDFPCNGESYLCSVTCEKSHTCSFLYFGVKAVEWSSRIPEGENLRANVLYFSNSTLVPYENDTDKFTHLRYLRMLWPLFAISSLYNLETLDIKMPSSILTITIGEFKQLRHLRCHGRVELQGSSNKLQNLQTLYYVSPDSVLESLINGGCFPNLKTLGLVLYSGDEKGRVEELRRLQGLKNLSKLKLRFNVKKRILMPALSVAAVEFLSNLTKITLVYPRDFNSRDMAALGRIPNLETLKLCQERWTETLSCGEAGSFPKLQVFLMIDVSSLKCLTLEEGVMPCLRRVVISDCCLLKEIPERLLSLSNLRHLHGNIWEEAENDSNKYELIRRTPTSSYS 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91298g00005 1040 ProSiteProfiles TIR domain profile. 1 170 IPR000157 GO:0007165
Stsc91298g00005 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 347 612 IPR027417 -
Stsc91298g00005 1040 Gene3D Ribonuclease Inhibitor 733 1024 IPR032675 -
Stsc91298g00005 1040 Gene3D - 169 331 IPR027417 -
Stsc91298g00005 1040 Gene3D - 344 506 IPR027417 -
Stsc91298g00005 1040 Gene3D - 512 597 IPR042197 -
Stsc91298g00005 1040 SMART till_3 1 142 IPR000157 GO:0007165
Stsc91298g00005 1040 Pfam NB-ARC domain 362 599 IPR002182 GO:0043531
Stsc91298g00005 1040 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 319 IPR044974 GO:0006952
Stsc91298g00005 1040 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 330 IPR027417 -
Stsc91298g00005 1040 Pfam TIR domain 2 176 IPR000157 GO:0007165
Stsc91298g00005 1040 SUPERFAMILY L domain-like 683 1014 - -
Stsc91298g00005 1040 SUPERFAMILY Toll/Interleukin receptor TIR domain 1 144 IPR035897 -
Stsc91298g00005 1040 PRINTS Disease resistance protein signature 377 392 - -
Stsc91298g00005 1040 PRINTS Disease resistance protein signature 452 466 - -
Stsc91298g00005 1040 PRINTS Disease resistance protein signature 547 561 - -
Stsc91298g00005 1040 PRINTS Disease resistance protein signature 783 799 - -
Stsc91298g00005 1040 Gene3D - 598 695 IPR036388 -
Stsc91298g00005 1040 FunFam Probable disease resistance protein At1g61300 340 506 - -
Stsc91298g00005 1040 Gene3D - 1 168 IPR035897 -
Stsc91298g00005 1040 FunFam Probable disease resistance protein At1g63360 598 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91298g00005 Stsc-Chr91298 15744 19508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91298g00005 51 319 WRKY Transcription Factor Family AT4G12020 29.286 1.24e-20 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91298g00005 - - aip:107637424 1100.89