Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91298g00002 ATGGCGGACGATGGAGAGGCTTCGACATCGTCCTTAACAGAAGGCATGTTTGATGCTTTTCTGAGCTTCAGAGGGAAAGATACTAGGAATCTGTTCACAGACTTTCTCTACCGTGAACTGGCAAAATACCAAAAGCTACAAGTGTTCAGAGATGAACCGGGTCTGGAACCAGGTGACGAAATCCAAGGTACTCTGATGGAAGCAATTAAGAGATCAAGGATGTTCATTGTTGTCATGAGTCCAAATTACTTAGAATCCCGATGGTGCCTCATGGAGCTAAAAGAGATGCTCAAGTACTCCAACAAAAAAAAGCGCTCAATTTTCCCAATTTTTTATCACGTGGAGCCTTCAGAAATGAGACTTCGGCAAACCGAAGAGTCTAAGAAAGCCATGGAGACACATGAACAGAGATACGGCAAAGACACCGTGGATTCCTGGAAGTCGGCTCTAGATACAGTTTCCGGGCTAAGCGGCGATCACATTGTTGAGGATAAAGACTATGAAAGTGAGGTGATGGAAAAGATTGCTAAAAAGGTTTTAGCAAAACATCGGGAGATCAAGCAAGTGTTGACTAAATTTGATTCTGAATTTGATGCAGTGGAATCACTTTTGAACCTTGAATCTCTTAATACTCTTGGTATGGTGGGAATTTACAATGAAGATGGTAAAATAGACACAACAACTTTTGCTTTTGAGCTTTACTACCAGATCAAGTATGAATTCCAAGAGGCAAGTTTTCTTAGTGATGTTAGTACACAGGTATGGAAAAACACCGCCAATGGCTTGGAAAATCTGAAAAAGGAGGTTCTTTCTGATATGGATGTGGAGGAAAGCACAAAGCAGAGGTTGCAGCATAGAAGAGTGCTTCTGGTTCTGGAAGGGGTTGATAGTATAGAGCATTTGGAGTTGCTATTAGGAGAACTGGGAATACGTGATTTGTTTGGTCCTGACAGTGGAAGTAGGATCATCATAACAACAGAAAACAAAAGTCTCTTTCAGGATTCTCCAGTGATGAATGGTGCTAAAGTTGAGCCATACTGCATTCGTGAAGGTGAATACGATGGAAACAGAGGAAGCTTTACTATGATGGAAGAAAATGTAGTGGGATTGAAGGAAGAATTCAGTGAGGTAATTAAACAACTAAAGGAAGAAAATTCTGCAGGGAATGTGGTTTCTATTGTTGGCATGGCTGGGTTGGGGAAGACTACCCTTGCTCGAAAGGTCTATACTAGCAGTGAGGCCAGACAGTTATTTCCTTGTCGTGCCTGGGCAACCATTTCCAAACAGCCCATATGGATCGAAGTTTTTAGAGAACTTCTCAAGTGTATGAAGGTACGCAAATCTGAATATGAAAATTCAAGTGAAGAGGAGTTGAAGGAGAAGGTGAGAAATTGTTTGAATGGGAAAAAGTATTTGGTAGTCCTTGACGATCTTTGGGAAACAAAGGTGTGGGACTTGATAAAGGATTCTTTACCGCCGGACAGGAAGAACAGTAGCATGATACTAATAACTACTCGTAATAGTCACGTAGCGTATCATGCAAGGTCAAAGGATCCTCATAACAGACCAAACTTGTTGGATAAGGATCAAAGTTGGGAAATGTTTCAGAATATTGTGTTCGGAGGAGAAGAGTGTCCTGATCATTTAACGCCTATCGGTAGATCAATTGCTTTCGATAGTTGCAAAGGTTTGCCATTAGCTATCAAAACTGTAGCCGGACTTGTTGTGATGAGGGAGAGAACAGAGGTTGCGTGGACAGAAATCAAGAACCTTCTCCCTTACTGGGATGCTTTTGAGGATGAAGAATGTGTCAAGGCAATGCAGAAGATTTTGAAGCTTAGCTACGATGATTTACCCGACAAGATAAAGCCTTGCTTTCTATATTTGGCGGTGTATCCCGAAGATAAAAAGATTCGAGTGAGGGATTTAATGGAGCTATGGATTATTGAAGGCTTCATACAGCAACCAAGACAGACCAGGAGAAGATTTGTGGCACCACAACCGGAAGATATTGCTGAGAAATACATGAAGGAGATGGTGTATCGTAACGTGGTACAAGTTGCAAGCAAGAGAAGTGATGGCGAAGGCTTTAAAACGTGTCAGATCCATGATCTCTTCCGGGATCTGTGCATATCGGAGAGCGCTAGAAACAGCAATGCTCGTGAATTGTCCTTCTCTTGCAACACAAGATCCTATGCCTGCTCAGCAACATGTAATGAATCACGCACTTGTTCCTTGTTCCTTTTTGGAGATCCAGGCAACTGGTCGAGTCATATTCCAGCAGAAGAAAGCTTCCGAGTTCATGTGCTATACTTTTCAAGCTTCAGACTCAATGTAGCAGAAGAAGAGGATATGCAGAGGTTGATCCACCTAAGGTACTTCAGAGCGGGCCTCATGTTTAGCAAATATTTGGATCACAGAGTCAACAAGTTAGAAACATTGGATAGAATGGAGGAGTTAGAAACATTGCATCTTCTGGAACACAAGGTGTTTGAGATAAGAACTGCAGAGATTAAGCAATTGAAACATCTCCGCTCCGTTGCGAGAGTGAAGCTCTTAGGAGAAAGAAGAGGAAGAGGAGGAGGAGGAGGAGAAAGAGTCATAATGCGGAATCTCCAAACCGCGTATCATGTGAGTCTTGATCCAGAGTCAGAATTCCTAAACACGAATGGATTCATATTTCCCAACTTGACTACACTGGGTTTAGATCTGTCTTTCTTTCAGAAAGTGGGAATGGAGCCCTTGAATCTGCATTTACTAAAGAGTCTACGCAAGCTGAAATTAACTTTTTATGATTCTGAGGAGAATCTCTTCTCATTGGATGAAATTGTTCTTCCGCCCAATCTTACCAAGATTAGCTTTTCCAATTCCACGTTAAACTACTCAGATATGGATGCTTTGGGACGGATTACTAGCCTCCAAATTCTAAAACTATTTGTGGTAAACTGCGGCAGGGACACAGCAGAAACTCTCGATTTCGGTGGTGCAGGGAGTTTCCCGCAGCTACAAGTGCTTATCTTGACAGACGTGTATGTCAAATCTCTTGCAATGGATGAAGGTGCAATGCCTCGTCTTCGACGTGTGGTTATCTGCGACTGCAAAATCTTGGAGGAAGTTCCTGAACAAATGATTTCCTTGGGTAGTAACTTCGAGATTGGAGACTATGAGGATTCTGATTCTGATTCTGATCATGATTCTCAATTTGATTACGGAGATGATGACTATTATTGA 3231 0.4206 MADDGEASTSSLTEGMFDAFLSFRGKDTRNLFTDFLYRELAKYQKLQVFRDEPGLEPGDEIQGTLMEAIKRSRMFIVVMSPNYLESRWCLMELKEMLKYSNKKKRSIFPIFYHVEPSEMRLRQTEESKKAMETHEQRYGKDTVDSWKSALDTVSGLSGDHIVEDKDYESEVMEKIAKKVLAKHREIKQVLTKFDSEFDAVESLLNLESLNTLGMVGIYNEDGKIDTTTFAFELYYQIKYEFQEASFLSDVSTQVWKNTANGLENLKKEVLSDMDVEESTKQRLQHRRVLLVLEGVDSIEHLELLLGELGIRDLFGPDSGSRIIITTENKSLFQDSPVMNGAKVEPYCIREGEYDGNRGSFTMMEENVVGLKEEFSEVIKQLKEENSAGNVVSIVGMAGLGKTTLARKVYTSSEARQLFPCRAWATISKQPIWIEVFRELLKCMKVRKSEYENSSEEELKEKVRNCLNGKKYLVVLDDLWETKVWDLIKDSLPPDRKNSSMILITTRNSHVAYHARSKDPHNRPNLLDKDQSWEMFQNIVFGGEECPDHLTPIGRSIAFDSCKGLPLAIKTVAGLVVMRERTEVAWTEIKNLLPYWDAFEDEECVKAMQKILKLSYDDLPDKIKPCFLYLAVYPEDKKIRVRDLMELWIIEGFIQQPRQTRRRFVAPQPEDIAEKYMKEMVYRNVVQVASKRSDGEGFKTCQIHDLFRDLCISESARNSNARELSFSCNTRSYACSATCNESRTCSLFLFGDPGNWSSHIPAEESFRVHVLYFSSFRLNVAEEEDMQRLIHLRYFRAGLMFSKYLDHRVNKLETLDRMEELETLHLLEHKVFEIRTAEIKQLKHLRSVARVKLLGERRGRGGGGGERVIMRNLQTAYHVSLDPESEFLNTNGFIFPNLTTLGLDLSFFQKVGMEPLNLHLLKSLRKLKLTFYDSEENLFSLDEIVLPPNLTKISFSNSTLNYSDMDALGRITSLQILKLFVVNCGRDTAETLDFGGAGSFPQLQVLILTDVYVKSLAMDEGAMPRLRRVVICDCKILEEVPEQMISLGSNFEIGDYEDSDSDSDHDSQFDYGDDDYY 1076
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91298g00002 1076 Gene3D - 620 712 IPR036388 -
Stsc91298g00002 1076 SMART till_3 16 156 IPR000157 GO:0007165
Stsc91298g00002 1076 Gene3D - 525 619 IPR042197 -
Stsc91298g00002 1076 PRINTS Disease resistance protein signature 561 575 - -
Stsc91298g00002 1076 PRINTS Disease resistance protein signature 465 479 - -
Stsc91298g00002 1076 PRINTS Disease resistance protein signature 390 405 - -
Stsc91298g00002 1076 ProSiteProfiles TIR domain profile. 15 183 IPR000157 GO:0007165
Stsc91298g00002 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 360 629 IPR027417 -
Stsc91298g00002 1076 FunFam Probable disease resistance protein At1g61300 355 519 - -
Stsc91298g00002 1076 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 158 IPR035897 -
Stsc91298g00002 1076 SUPERFAMILY L domain-like 702 1043 - -
Stsc91298g00002 1076 Pfam NB-ARC domain 373 617 IPR002182 GO:0043531
Stsc91298g00002 1076 MobiDBLite consensus disorder prediction 1055 1076 - -
Stsc91298g00002 1076 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 335 IPR027417 -
Stsc91298g00002 1076 FunFam Probable disease resistance protein At1g63360 615 712 - -
Stsc91298g00002 1076 Gene3D - 16 181 IPR035897 -
Stsc91298g00002 1076 Pfam TIR domain 17 185 IPR000157 GO:0007165
Stsc91298g00002 1076 Gene3D Ribonuclease Inhibitor 751 1052 IPR032675 -
Stsc91298g00002 1076 Gene3D - 355 519 IPR027417 -
Stsc91298g00002 1076 Gene3D - 182 337 IPR027417 -
Stsc91298g00002 1076 PANTHER DISEASE RESISTANCE PROTEIN RP 368 1015 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91298g00002 Stsc-Chr91298 5104 9515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91298g00002 66 332 WRKY Transcription Factor Family AT4G12020 27.599 4.51e-20 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91298g00002 - - aip:107637424 875.159