Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91291g00003 ATGGAACCACTAAATGAAACAAATAAGAATGATAGAGCATCAGTGGTAGGAGATGCCATTGACTACATCAAAGAGCTTCTAAGAACAGTGAATGAGCTCAAATCATTGGTGGAGAAAAAAAGTGAGAGCCTAATAAGGAGTTCTTGGATTCAAAGAAAATCAAAAGACAGTGAGGTTGATGTGAGAATCATTGACAATGAGGTAACAATAAAGATTGTTCAAAGGAAGAGGATCAATGACAATAATTGCATATTAGTTTATGTTCCAAAGGTTCTTGATGAACTTAAACTTGATCTTCAACATGTTGGTGGTGGCCACATTGGTGATTTCTGCAGCTTTCTCTTCAATAGCAAGATATGTGAAGGTTCATCAGTATATGCAAGTGCCATAGCCAACAAGCTTATTGAGGTCATGGACAGAAGTTTGGCACCAATATGA 438 0.3699 MEPLNETNKNDRASVVGDAIDYIKELLRTVNELKSLVEKKSESLIRSSWIQRKSKDSEVDVRIIDNEVTIKIVQRKRINDNNCILVYVPKVLDELKLDLQHVGGGHIGDFCSFLFNSKICEGSSVYASAIANKLIEVMDRSLAPI 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91291g00003 145 Coils Coil 23 43 - -
Stsc91291g00003 145 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 4 41 IPR036638 GO:0046983
Stsc91291g00003 145 PANTHER TRANSCRIPTION FACTOR BHLH91 8 42 IPR045895 GO:0006355|GO:0048658
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91291g00003 Stsc-Chr91291 17537 18431 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91291g00003 9 140 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G06170 52.761 5.63e-47 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91291g00003 - - aip:107643853 239.965