Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91285g00002 ATGGGTCGTAACTCGCAAGCTTGGCCCAAAAGCCTTAAGCTCCCGAGTGGGGACAATGTTACGGGTCAACCCCTAGGGCCCAAATCATTAAGGAATAAGGTCACCAAAGAGTGGCCCACAAGTAAAAGGACTATTCACCTCTACATCAACCCCTTCTCGGCTATAGCTTTCGGCCACGCCGTAGGGCTTGTCATCGAAGGTACATCTTGTTCCCGAACATTATTGAGGAACAGAGTTTCTGCCCAACAAGCACGGGAAAGAAAGAAGGTATATGTGAATGACTTGGAATCAAGAGCTAAAGAGTTGGAAGATAAGAATTCCAACTTAGAAGAGCGTATCTCCACCTTAATCAATGAGAACACCATGCTCCGCAAGGTTCTCATGAATACGAGGCCTAAAGTTGATGAGAATGTTGAAGCATAG 423 0.461 MGRNSQAWPKSLKLPSGDNVTGQPLGPKSLRNKVTKEWPTSKRTIHLYINPFSAIAFGHAVGLVIEGTSCSRTLLRNRVSAQQARERKKVYVNDLESRAKELEDKNSNLEERISTLINENTMLRKVLMNTRPKVDENVEA 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91285g00002 140 CDD bZIP_HY5-like 72 120 - -
Stsc91285g00002 140 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 72 87 IPR004827 GO:0003700|GO:0006355
Stsc91285g00002 140 Coils Coil 85 126 - -
Stsc91285g00002 140 SMART brlzneu 66 129 IPR004827 GO:0003700|GO:0006355
Stsc91285g00002 140 MobiDBLite consensus disorder prediction 1 32 - -
Stsc91285g00002 140 Pfam bZIP transcription factor 73 125 IPR004827 GO:0003700|GO:0006355
Stsc91285g00002 140 Gene3D Single helix bin 88 129 - -
Stsc91285g00002 140 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 74 136 IPR044280 GO:0000981|GO:0045944
Stsc91285g00002 140 SUPERFAMILY Leucine zipper domain 72 128 IPR046347 GO:0003700|GO:0006355
Stsc91285g00002 140 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 72 130 IPR004827 GO:0003700|GO:0006355
Stsc91285g00002 140 MobiDBLite consensus disorder prediction 1 28 - -
Stsc91285g00002 140 FunFam Transcription factor HY5 88 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91285g00002 Stsc-Chr91285 12709 15648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91285g00002 74 137 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT3G17609 79.688 5.89e-30 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc91285g00002 bZIP_1 3.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91285g00002 K16241 - fve:101297428 122.094