Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc91281g00002 ATGCCCGACGACCACCACTCCACACCGCCAACAATGAACGACCAGCTCTCCAAGCAAACCTCGATCTTCGGTCTCCGACTCTGGATGGTCGGCGGCATCTGCGTCGGCGCCGCCATCGTCCTCATCCTGGTGCTCATCTCCCTCTGGCTCGCCTCCAAGCTCTCCACCACCCACAAAAGAAACCGCCACACCATTCCCGACGTCTCCAAAGAAATTCAAGAAATCAAGATAGACCGCCATCCGTCTTCTTCTTCTCCCTCCTCTGTTTCCAAGCCCAACGGGCTTGGCCTCCAGCCCGACTCCACTCCTGAGCCCGAGCCTGACCGCCTCCCTCCGCCAACAGAAGCAGAAGAAAGCAACAACAACAACAACGCGGTTTTGGGGATTAAGAGAATTCAGTTTGAGATTGGGAAGAACCACAGAATATCGTACCCTGAACAACGCGCTTTGGTGACGTCATGTTCGCAGTGGAATCAGGGAAGCGGAGGAGAGGCGTTGGAACATCATAATCAGCAAGGTGCTACGGTGATCCCTGAGGTGTCACATTTGGGTTGGGGACACTGGTACACCCTCAGGGAGCTTGAACTTGCCACCAACTGTTTCGCCAACGAGAACGTTATCGGTGAAGGTGGCTACGGCATTGTTTACCACGGCATCTTCAACGACAACACTCATGTCGCCATCAAGAATTTGCTCAATAATAAGGGTCAAGCTGAGAAAGAGTTCAAGGTTGAAGTGGAAGCTATAGGGCGAGTTCGCCATAAGAATCTCGTGAGGTTGCTTGGGTATTGTGCTGAAGGTGCTCATAGAATGCTTGTATATGAGTACGTTGATAATGGAAACTTGGAGCAATGGCTGCATGGGGATGTTGGTCCTTGTAGTCCTCTCACTTGGCAAATTAGAATGAACATAATTCTGGGAACTGCAAAAGGGTTGGCTTATCTCCATGAGGGGTTGGAACCCAAAGTTGTTCATCGCGATATTAAATCGAGCAACATTTTGATTGACAAGCAATGGAATTCAAAGGTGTCCGACTTTGGACTTGCTAAACTCCTTGACTCTGATAGCAATTTCATTAAGACTCGTGTAATGGGTACATTCGGATATGTGGCTCCTGAATATGCAAGTACCGGCATGTTGAATGAACGAAGCGATGTGTATAGTTTTGGGATTCTTATAATGGACTTAATTACAGGCAGGAATCCGGTTGATTATAGTCGGCCACCAGAGGAGGTGAATTTAGTTGACTGGCTAAAGAAGATGGTTAGCAACAGAAATGCAGAGGGAGTGTTGGATCCGAAACTCCCTGAGAAACCGAATTCAAGGGCACTAAAAAGAGCACTTATTGTAGCGTTGCGCTGCACAGACTCAAATGCACAAAAGCGGCCTAAAATGGGACGTATTGTACACATGCTTGAAGACGAAGAATCCCCTTACAAAGAGGATCGTAGAGCTAGAAGGGAATCGGGATACTCACCCAAGAATAAAGTAAACGACAATCCGAAAGGGGAGGCAACTGTTTCCAGTGATGATTGTAGAACTGAAAGTGGGATGCAGGTCAATGAGACAAAATGA 1575 0.4819 MPDDHHSTPPTMNDQLSKQTSIFGLRLWMVGGICVGAAIVLILVLISLWLASKLSTTHKRNRHTIPDVSKEIQEIKIDRHPSSSSPSSVSKPNGLGLQPDSTPEPEPDRLPPPTEAEESNNNNNAVLGIKRIQFEIGKNHRISYPEQRALVTSCSQWNQGSGGEALEHHNQQGATVIPEVSHLGWGHWYTLRELELATNCFANENVIGEGGYGIVYHGIFNDNTHVAIKNLLNNKGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGPCSPLTWQIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNILIDKQWNSKVSDFGLAKLLDSDSNFIKTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMDLITGRNPVDYSRPPEEVNLVDWLKKMVSNRNAEGVLDPKLPEKPNSRALKRALIVALRCTDSNAQKRPKMGRIVHMLEDEESPYKEDRRARRESGYSPKNKVNDNPKGEATVSSDDCRTESGMQVNETK 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc91281g00002 524 CDD STKc_IRAK 207 473 - -
Stsc91281g00002 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Stsc91281g00002 524 FunFam Probable serine/threonine-protein kinase At1g01540 181 276 - -
Stsc91281g00002 524 ProSitePatterns Protein kinases ATP-binding region signature. 207 229 IPR017441 GO:0005524
Stsc91281g00002 524 PANTHER OS01G0323000 PROTEIN 11 489 - -
Stsc91281g00002 524 MobiDBLite consensus disorder prediction 494 524 - -
Stsc91281g00002 524 MobiDBLite consensus disorder prediction 467 493 - -
Stsc91281g00002 524 FunFam Putative receptor-like serine/threonine-protein kinase 277 487 - -
Stsc91281g00002 524 ProSiteProfiles Protein kinase domain profile. 201 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91281g00002 524 SMART serkin_6 201 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91281g00002 524 SUPERFAMILY Protein kinase-like (PK-like) 185 475 IPR011009 -
Stsc91281g00002 524 MobiDBLite consensus disorder prediction 65 123 - -
Stsc91281g00002 524 Pfam Protein kinase domain 203 470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc91281g00002 524 Gene3D Transferase(Phosphotransferase) domain 1 277 490 - -
Stsc91281g00002 524 Gene3D Phosphorylase Kinase; domain 1 167 276 - -
Stsc91281g00002 524 MobiDBLite consensus disorder prediction 467 524 - -
Stsc91281g00002 524 MobiDBLite consensus disorder prediction 79 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc91281g00002 Stsc-Chr91281 11588 14874 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc91281g00002 178 518 Trihelix Transcription Factor Family AT1G70460 42.816 5.33e-87 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Stsc91281g00002 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc91281g00002 - - gmx:100797440 720.309